GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 02:17:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Erinaceus europaeus genome assembly, chromosome: 2.
OX485811.1:79579180-79579199
TAAAATATATCTCCTAATCTCTTCTGACAA79579180CATCAGCATCATCGTTACCCTTTTATAATCTTTAGAAGAAACATTGTATA
Cerastoderma edule genome assembly, chromosome: 4.
OX401407.1:32697025-32697044
TATCATCATTGTTGTCATCAGCATCAGCAT32697025CATCAGCATCATCGTTACCCTAACTTGCATAATCATCACCACTTTCACCA
Parasteatoda lunata genome assembly, chromosome: 10.
OX421979.1:91305058-91305077
TATCTGACTCTATGGCCATCTTGGCTGCTG91305058CATCAGCATCATCGTTACCCCGGATACCCACATGAGCCTTAACCCAATTC
Sarcophaga carnaria genome assembly, chromosome: 4.
OY283152.1:128116041-128116060
CAGCCTAGAATACATAGTTTTGATCATAAT128116041CATCAGCATCATCGTTACCCCATTTGTTGTCATCTTCGAAACATAATAAA
50-L026096.SEQ Pigeonpea genomic pBluescript library Cajanus cajan genomic 5', genomic survey sequence.
CZ445540.1:306-325
GCTTTTGTTGAGTTCTCCCTGTGATGTTCA306GGGTAACGATGATGCTGATGGCAGTGAGTCACAGAAGTTGGACGTCGAAG
Sarcophaga variegata genome assembly, chromosome: 4.
OW026361.1:647947-647966
ATTATTATGTTTCAAAGATGACAACAAATG647947GGGTAACGATGATGCTGATGATTATGATCAAAACTATGTATTCTAGGCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/Catcagcatcatcgttaccc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : Catcagcatcatcgttaccc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CATCAGCATCATCGTTACCC&k=0&no_gap=0&offset=0&limit=50
0.152 | 0.050 | search_minus_done; http://172.18.8.135:50400/match?q=GGGTAACGATGATGCTGATG&k=0&no_gap=0&offset=0&limit=46
0.154 | 0.001 | cgi_end;

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