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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 20:45:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lutra lutra genome assembly, chromosome: 4.
LR738406.1:51545842-51545860
CTCCTTACCTTCTAAGTATGGGGGCCAGTT51545842CCAAATTTCACCCAAGAAAATGCTGAGGTTGTAAGCCAACAACACTTGA
Meles meles genome assembly, chromosome: 1.
OV277441.1:51396647-51396665
CTCCTTACCTTCTGAGTATGGGGACCAGTT51396647CCAAATTTCACCCAAGAAAATGCTGAGGTTGTAAACCAACAACACTTGA
Martes martes genome assembly, chromosome: 4.
OY734066.1:50289492-50289510
CTCCTTACCTTCTGAGTATGGGGGCCAGTT50289492CCAAATTTCACCCAAGAAAATGCTGAGGTTGTAAACCAACAACACTCGA
Sphaeramia orbicularis genome assembly, chromosome: 11.
LR597468.1:52032519-52032537
TTTAAAACCAAAAATAATTGTCTGGTTTCT52032519CCAAATTTCACCCAAGAAAAAAACAAACCATTAAACTTAAATGAATATT
Erithacus rubecula genome assembly, chromosome: 2.
LR812104.1:45306362-45306380
TACAACATAATTTCTTGAAAGTACTTTTTT45306362CCAAATTTCACCCAAGAAAATTCCTGGTTTTCCATAATTTTTGGTGAGC
Zeus faber genome assembly, chromosome: 1.
OY482845.1:5507669-5507687
ACAGAAAACACTGCCTGGCAACCAAACGTC5507669CCAAATTTCACCCAAGAAATCGAAAGTGAAAGTAATCTGATCACGGATT
Zeus faber genome assembly, chromosome: 1.
OY482845.1:6208700-6208718
ACAGAAAACACTGCCTGGCAACCAAACGTC6208700CCAAATTTCACCCAAGAAATCGAAAGTGGAAGTAATATGATCACGGATT
Zeus faber genome assembly, chromosome: 1.
OY482845.1:6369320-6369338
ACAGAAAACACTGCCTGGCAACCAAACGTC6369320CCAAATTTCACCCAAGAAATCGAAAGTGAAAGTAATATGATCACGGATT
Zeus faber genome assembly, chromosome: 1.
OY482845.1:6497308-6497326
ACAGAAAACACTGCCTGGCAACCAAACGTC6497308CCAAATTTCACCCAAGAAATCGAAAGTGAAAGTAATCTGATCACGGATT
Zeus faber genome assembly, chromosome: 1.
OY482845.1:6572409-6572427
ACAGAAAACACTGCCTGGCAACCAAACGTC6572409CCAAATTTCACCCAAGAAATCGAAAGTGGAAGTAATCTGATCACGGATT
Zeus faber genome assembly, chromosome: 4.
OY482848.1:32545511-32545529
ACAGAAAACACTGCCTGGCAACCAAACGTC32545511CCAAATTTCACCCAAGAAATCGAAAGTGAAAGTAATCTGATCACGGATT
Rattus norvegicus clone CH230-36I20, WORKING DRAFT SEQUENCE.
AC096022.10:72366-72384
CAAGCAACAGCTGTCCTCATCTGAACCTGC72366CCAAATTTCACCCAAGAAAATGTGGATTTCAACCACAGACCCATTCTCC
Rattus norvegicus clone CH230-103J21, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC107563.4:83072-83090
CAATCAACAGCTGTCCTCATCTGAACCTGC83072CCAAATTTCACCCAAGAAAATGTGGATTTCAACCACAGACCCATTCTCC
Rattus norvegicus clone CH230-301L24, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC128624.2:46568-46586
CAATCAACAGCTGTCCTCATCTGAACCTGC46568CCAAATTTCACCCAAGAAAATGTGGATTTCAACCACAGACCCATTCTCC
Gossypioides kirkii chromosome KI_12.
CP032254.1:34758492-34758510
CTTTTTCATTCAAAACAAGATCTCAATCGT34758492CCAAATTTCACCCAAGAAAAACATAACAATAGAGAGAAAAAAGGAGGAA
Solanum tuberosum cultivar P8 chromosome 6.
CP046679.1:53876120-53876138
CTTATGATAAGCTAGTTTTTGAATGTATAT53876120CCAAATTTCACCCAAGAAAAGAGGGTTACAAAAGGAACAGAAAGGAATA
Solanum tuberosum cultivar MSH/14-112 chromosome 6.
CP046692.1:53877912-53877930
CTTATGATAAGCTAGTTTTTGAATGTATAT53877912CCAAATTTCACCCAAGAAAAGAGGGTTACAAAAGGAACAGAAAGGAATA
Solanum tuberosum cultivar Solyntus chromosome 6.
CP055239.1:59985080-59985098
CTTATGATAAGCTAGTTTTTGAATGTATAT59985080CCAAATTTCACCCAAGAAAAGAGGGTTACAAAAGGAACAGAAAGGAATA
Solanum verrucosum cultivar 11H23 chromosome 6.
CP133617.1:49869198-49869216
CTTATGATAAGCTAGTTTTTGAATGTATAT49869198CCAAATTTCACCCAAGAAAAGAGGGTTACAAAAGGAACAGAAAGGAATA
Solanum pennellii chromosome ch06, complete genome.
HG975445.1:55960634-55960652
CTTATGATAAGCTAGTTTTTGAATGTAAAT55960634CCAAATTTCACCCAAGAAAAGAGGGTTACAAAAGGAACAAGAAAGGAAC
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:66278126-66278144
ATTATGATAAGCTAGTTTTTGAATGTATAG66278126CCAAATTTCACCCAAGAAAAGACCGTTACAAAGGGAACAAGAAAGGAAT
Solanum dulcamara genome assembly, chromosome: 8.
OX359259.1:73500203-73500221
CTTATGATAAGCTAGTTTTTGAATGTATAG73500203CCAAATTTCACCCAAGAAAAGAGGGGTTACAAAGGGAACAAGAAAGGAA
Coremacera marginata genome assembly, chromosome: 1.
OU612043.1:237717217-237717235
TTTTGGGAAAAATGGTCCAAAAACAAAAAA237717217CCAAATTTCACCCAAGAAAAATGTAAAATTGCCCAATTCTTTTCTTAAT
Machimus atricapillus genome assembly, chromosome: 1.
OW121784.1:38619079-38619097
GAGAAAATTATTCTGATAATCCTACAAATC38619079CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: 1.
OW121784.1:46846849-46846867
GAGAAAATTATTCTGATAATCCTACAAATC46846849CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: 1.
OW121784.1:48621726-48621744
GAGAAAATTATTCTGATAATCCTACAAATC48621726CCAAATTTCACCCAAGAAAATTATTACCTGGCATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: X.
OW121785.1:24526056-24526074
GAGAAAAGTATTCTGATAATCCTACAAATC24526056CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTACCC
Machimus atricapillus genome assembly, chromosome: X.
OW121785.1:30060849-30060867
GACAAAATTATTCTGATAATCGTACAAATC30060849CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: X.
OW121785.1:30903039-30903057
GACAAAATTATTCTGATAATCCTACAAATC30903039CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: X.
OW121785.1:43526312-43526330
GAGAAAATTATTCTGATAATCCTACAAATC43526312CCAAATTTCACCCAAGAAATTTATTACCTGACATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: X.
OW121785.1:45212649-45212667
GAGAAAATTATTCTGATAATCCTACAAATC45212649CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: 2.
OW121786.1:21988548-21988566
GAGAAAATTATTCTGATAATCCTACAAATC21988548CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: 2.
OW121786.1:24120163-24120181
GAGAAAATTATTCTGATAATCCTACAAATC24120163CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: 3.
OW121787.1:18679007-18679025
GAGAAAATTATTCTGATAATCCTACAAATC18679007CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTATCC
Machimus atricapillus genome assembly, chromosome: 4.
OW121788.1:11588052-11588070
GAGAAAATTATTCTGATAATCCTACAAATC11588052CCAAATTTCACCCAAGAAAATTATTACCTGACATCAATCGTCCCTATCC
Agriotes lineatus genome assembly, chromosome: 6.
OW679199.1:6974127-6974145
AACCCAAACTATAACACATTTGCACCCAAA6974127CCAAATTTCACCCAAGAAATAGACCTGAACCAATGGACTTTAGTACCAT
Schistosoma spindale genome assembly, chromosome: Z.
OX336416.1:40534379-40534397
CACAGAATACCAAACAACCGAACGCAGTGT40534379CCAAATTTCACCCAAGAAATACAACGCTCAAGTTACAAGAAGAATGATC
Neoitamus cyanurus genome assembly, chromosome: 1.
OX384540.1:9832480-9832498
GAGAAAAATATTCTGATAGTCCTACAAATC9832480CCAAATTTCACCCAAGAAAATTATTACCAGAGATCAATTGTCCCTATCC
Neoitamus cyanurus genome assembly, chromosome: 4.
OX384543.1:15298643-15298661
TAGGAAAATATTCTGATAGTCCTACAAATC15298643CCAAATTTCACCCAAGAAAATTATTACCAGACATCAATTGTCCCTTTCC
Neoitamus cyanurus genome assembly, chromosome: 10.
OX384549.1:2241860-2241878
GAGAAAAATATTCTGATAGTCCTACAAATC2241860CCAAATTTCACCCAAGAAAATTATTACCAGACATCAATTGTCCCTATCC
Pyrausta nigrata genome assembly, chromosome: 5.
OX438941.1:3683532-3683550
CAGAGACCACAACCTCATCCCACGATGTGT3683532CCAAATTTCACCCAAGAAAGACATACGCGGGAGTGCGAAGATCTTAAAC
Pyrausta nigrata genome assembly, chromosome: 5.
OX438941.1:3686116-3686134
CAGAGACCACAACCTCATCCCACGATGTGT3686116CCAAATTTCACCCAAGAAAGACATACGCGGGAGTGCGAAGATCTTAAAC
Pyrausta nigrata genome assembly, chromosome: 6.
OX438942.1:5743868-5743886
CAGAGACCACAACCTCATCCCACGATGTGT5743868CCAAATTTCACCCAAGAAAGACATACGCGGGAGTGCGAAGATCTTAAAC
Pyrausta nigrata genome assembly, chromosome: 6.
OX438942.1:5746452-5746470
CAGAGACCACAACCTCATCCCACGATGTGT5746452CCAAATTTCACCCAAGAAAGACATACGCGGGAGTGCGAAGATCTTAAAC
Pyrausta nigrata genome assembly, chromosome: 22.
OX438958.1:9975589-9975607
CAGAGACCACAACCTCATCCCACGATGTGT9975589CCAAATTTCACCCAAGAAAGACATACGCGGGAGTGCGAAGATCTTAAAC
Dysmachus trigonus genome assembly, chromosome: 4.
OX454322.1:32951708-32951726
GAAAAGATTATTCTGGTAATCCTACAAATC32951708CCAAATTTCACCCAAGAAAACTACTATCTAACATCAGTTGTCCCTATCT
Cerastis leucographa genome assembly, chromosome: 7.
OY720385.1:18377106-18377124
CGACAATCCAGGGTATGGTCGAACCGTGTG18377106CCAAATTTCACCCAAGAAATCAATCCAAAAATTCGCCAAACCGTTAAGG
Stenodema calcarata genome assembly, chromosome: 8.
OY986055.1:566760-566778
GCATTGAGAGATCAATTTATAGAAGACCAA566760CCAAATTTCACCCAAGAAATACCAACCACTAATCAACTACTCAACTTCC
Stenodema calcarata genome assembly, chromosome: 8.
OY986055.1:629545-629563
GCATTGAGAGATCAATTTATAGAAGACCAA629545CCAAATTTCACCCAAGAAATACCAACCACTAATCAACTACTCAACTTCC
Erebia epiphron genome assembly, chromosome: 3.
OZ009948.1:727729-727747
TGTAAGATATTATGATCTATGTAGTCTGTA727729CCAAATTTCACCCAAGAAAATGTAGACAGACAGACAAATCTATTAATAA
Maratus speciosus genome assembly, chromosome: X2.
OZ010796.1:475820769-475820787
AAAAGTTCATGGCTATTAAGATATTTTCTA475820769CCAAATTTCACCCAAGAAATGCTTTCACGGAAACACACTGTGTAGTTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/Ccaaatttcacccaagaaa
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : Ccaaatttcacccaagaaa | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.323 | 0.314 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAATTTCACCCAAGAAA&k=0&no_gap=0&offset=0&limit=50
0.471 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCTTGGGTGAAATTTGG&k=0&no_gap=0&offset=0&limit=0
0.471 | 0.000 | cgi_end;

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