GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:39:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

GM_WBb0107D11.f GM_WBb Glycine max genomic clone GM_WBb0107D11 5', genomic survey sequence.
ED743908.1:487-506
AAAGGGCCACGTGCTCACAACCAATGGGTA487CTGTTCCAATTCCACGGTTTCATACCCCACCACCTAATCACAAACAAACA
GSS_Ba174I11.R GSS_Ba Glycine soja genomic 3', genomic survey sequence.
HN105462.1:429-448
AAAGGGCCACGTGCTCACAACCAATGGGTA429CTGTTCCAATTCCACGGTTTCATACCCCACCACCTAATCACAAACAAACA
Glycine max cultivar Williams 82 chromosome 4.
CP126429.1:17997254-17997273
AAAGGGCCACGTGCTCACAACCAATGGGTA17997254CTGTTCCAATTCCACGGTTTCATACCCCACCACCTAATCACAAACAAACA
Selenia dentaria genome assembly, chromosome: 19.
OU862894.1:12809362-12809381
TTGGGGTTGGACTGCGTCTTAAGCAATGCC12809362CTGTTCCAATTCCACGGTTTTACTGCACTTATGTTGTAACCTGTTTGTGA
87-L026095.SEQ Pigeonpea genomic pBluescript library Cajanus cajan genomic 3', genomic survey sequence.
CZ445531.1:644-663
CACCATAAAATCAAAATTTGTGTAATTAAA644AAACCGTGGAATTGGAACAGTGTGAGCAGGAAAATCTAAGACTCACTCCA
Verbascum thapsus genome assembly, chromosome: 15.
OY770118.1:13671202-13671221
AAATGCAGGTGCTACAATAGGGAAAGGTAT13671202AAACCGTGGAATTGGAACAGTAATAGGTGGTGGATTGGGGTGTTTGGCTG
Verbascum thapsus genome assembly, chromosome: 15.
OY770118.1:13678322-13678341
AAATGCAGGTGCTACAATAGGGAAATGTAT13678322AAACCGTGGAATTGGAACAGTGATAGGTGGTGGATTGGGATGTTTGGCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/Ctgttccaattccacggttt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : Ctgttccaattccacggttt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.355 | 0.346 | search_plus_done; http://172.18.8.135:50400/match?q=CTGTTCCAATTCCACGGTTT&k=0&no_gap=0&offset=0&limit=50
0.432 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=AAACCGTGGAATTGGAACAG&k=0&no_gap=0&offset=0&limit=46
0.434 | 0.002 | cgi_end;

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