GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:42:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

82-L026095.SEQ Pigeonpea genomic pBluescript library Cajanus cajan genomic 3', genomic survey sequence.
CZ445522.1:183-202
AGAGTTCGCAGTTTTTATGCTAAGAGGGTT183CTTCCCCCAACTAAGATCCATTTTCATCTCATTCTACTCACAGAAACCCT
CccaBa036-K21TV CccABa Cajanus cajan genomic clone CccaBa036-K21, genomic survey sequence.
FI222820.1:703-722
AGAGTTCATAGTTTTTATGCTGAGAGGGTT703CTTCCCCCAACTAAGATCCATTTTCATCTCATTCTACTCACAGAAACCCT
CccaBa039-I2TR CccABa Cajanus cajan genomic clone CccaBa039-I2, genomic survey sequence.
FI208942.1:347-366
AGAAATTCTGTGAGTAGAATGAGATGAAAA347TGGATCTTAGTTGGGGGAAGAACCCTCTCAGCATAAAAACTACGATCTCT
CccaBb025-O12JR CccABb Cajanus cajan genomic clone CccaBb025-O12, genomic survey sequence.
FI238871.1:522-541
ATGGTTTCTGTGAGTAAAATGAGATAAGAA522TGGATCTTAGTTGGGGGAAGAACTCTCTCAGCAAAAAAATTGTGATATCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/Cttcccccaactaagatcca
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : Cttcccccaactaagatcca | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.165 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCCCCCAACTAAGATCCA&k=0&no_gap=0&offset=0&limit=50
0.274 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=TGGATCTTAGTTGGGGGAAG&k=0&no_gap=0&offset=0&limit=48
0.275 | 0.002 | cgi_end;

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