GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-11 17:28:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KR 1020090132213-A/27: A method for discriminating Chinese cabbage cultivars using molecular markers.
DI175396.1:1-27
1GAAACAAATTATTTAAAAATCAGACCA
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 878 unordered pieces.
FJ789640.1:4538586-4538612
ATATATAATTGTACTTTAATTCAAATGCAA4538586GAAACAAATTATTTAAAAATCAGACCAAATACATAATAATGTAATTCCTATAGATAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH102A07, complete sequence.
AC189617.1:144097-144123
ATATATAATTGTACTTTAATTCAAATGCAA144097GAAACAAATTATTTAAAAATCAGACCAAATACATAATAATGTAATTCCTATAGATAG
Brassica napus genome assembly, chromosome: A07.
HG994361.1:17981057-17981083
ATATACAATTGTACTTTAATTCAAATGCAA17981057GAAACAAATTATTTAAAAATCAGACCAAATACATAATAATGTAATTCCTATAGATAG
Brassica rapa genome, scaffold: A07.
LR031574.1:16953748-16953774
ATATACAATTGTACTTTAATTCAAATGCAA16953748GAAACAAATTATTTAAAAATCAGACCAAATACATAATAATGTAATTCCTATACATAG
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:17245229-17245255
ATATACAATTGTACTTTAATTCAAATGCAA17245229GAAACAAATTATTTAAAAATCAGACCAAATACATAATAATGTAATTCCTATACATAG
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 66 unordered pieces.
FJ789649.1:87642-87668
CTATCTATAGGAATTACATTATTATGTATT87642TGGTCTGATTTTTAAATAATTTGTTTCTTGCATTTGAATTAAAGTACAATTATATAT
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:11647855-11647881
CTATCTATAGGAATTACATTATTATGTATT11647855TGGTCTGATTTTTAAATAATTTGTTTCTTGCATTTGAATTAAAGTACAATTGTATAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAACAAATTATTTAAAAATCAGACCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAACAAATTATTTAAAAATCAGACCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.403 | 0.394 | search_plus_done; http://172.18.8.135:50400/match?q=GAAACAAATTATTTAAAAATCAGACCA&k=0&no_gap=0&offset=0&limit=50
0.522 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTCTGATTTTTAAATAATTTGTTTC&k=0&no_gap=0&offset=0&limit=44
0.524 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).