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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-15 16:23:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Taurulus bubalis genome assembly, chromosome: 21.
OU342731.1:11385884-11385901
TTGAGGTTTGATTTCTGAGACCTGGAAACT11385884GAAACAGCCGCGAGAGAAAACGTGCTGCAGTTTAAAATAAAGCCTCGG
Eutrigla gurnardus genome assembly, chromosome: 9.
OY741272.1:18119096-18119113
AAAAAACCAAAAGAGCAGAAATGAACGTGT18119096GAAACAGCCGCGAGAGAACGACGGAGAATTATCTGCGTGTCGTAATTC
TSA: Arachis hypogaea Ahy.Unigene46041 mRNA sequence.
JR580161.1:133-150
AGCGACAGAGCTTGCGACGAGCTTAAGTCT133GAAACAGCCGCGAGAGAAGCGTGAAACTGGAGAGAGAGAGAGAGAGAG
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:131504693-131504710
AGCGACAGAGCTTGCGACGAGCTTAAGTCC131504693GAAACAGCCGCGAGAGAAGCGTGAAACCGGAGAGAGAGAGGTCGACGG
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:13946954-13946971
CAACCAGCAAATTAGTAGCAGCTGCCTTTT13946954GAAACAGCCGCGAGAGAACTTCCCCAACCAAAATAAAGAGATAGGGAG
Arachis hypogaea clone AH2TC9E08 microsatellite sequence.
DQ099150.1:13-30
GAGCTTAAGTCT13GAAACAGCCGCGAGAGAAGCGTGAAACTGGAGAGAGAGAGAGAGAGAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392551.1:23629735-23629752
AAAAGCTGTGGATGGGAGTGCCTCGGCAGA23629735GAAACAGCCGCGAGAGAAACGAGGGAGAGCAAATCCTCGATGCATCAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392560.1:22124834-22124851
AAAAGCTGTGGATGGGAGTGCCTCGGCAGA22124834GAAACAGCCGCGAGAGAAACGAGGGAGAGCAAATCCTCGATGCATCAG
Caligus rogercresseyi isolate FCH chromosome 10.
CP045899.1:16212698-16212715
TTCATTTAACTGAGATGATATTAACACCTC16212698GAAACAGCCGCGAGAGAAGTAATGCTTTATTTCATAAAGCGAATTATT
Hermetia illucens genome assembly, chromosome: 6.
LR899014.1:41253571-41253588
CATCCTGACTTCAGAGGAAAAGGAATTCTC41253571GAAACAGCCGCGAGAGAAGGGCACGTAGTTTTAAATACCAGATCCACC
Lasioglossum morio genome assembly, chromosome: 1.
OU744323.1:35287841-35287858
CAGGACCGGCGAACAAATTCTGGGGCTTGC35287841GAAACAGCCGCGAGAGAAAACAGGTCGGCGACTTTGAACGCATTCTCG
Montipora capitata genome assembly, chromosome: 12.
OX421456.1:37713969-37713986
GGCCGAACAAAAAATAGGAATGTCCGACAA37713969GAAACAGCCGCGAGAGAAAAAAACATACGAGATAAGCGAATGAATTGT
Ceriagrion tenellum genome assembly, chromosome: 7.
OY720639.1:20207121-20207138
AAGAATTCGATTTGAGACTAATTAAAAAAT20207121GAAACAGCCGCGAGAGAAGCCTGGAATAGAGATCGGTATTAAATCAAT
Diplazon laetatorius genome assembly, chromosome: 9.
OY759160.1:4148713-4148730
ATATATATATATATATATATATATGAGGAT4148713GAAACAGCCGCGAGAGAAGACGCGAGAGCGGTAAAGCTTTCGGGAGAA
Stenodema calcarata genome assembly, chromosome: 10.
OY986057.1:17207532-17207549
TATTTTTACTCATAATCGAACGAGTAAAAT17207532GAAACAGCCGCGAGAGAAATAACAATCTTCTTACTAAGGATTAACTGG
Rhinatrema bivittatum genome assembly, chromosome: 12.
LR584398.1:66232835-66232852
AATTATTTAGGGAACGGCGGCCATTTTATC66232835TTCTCTCGCGGCTGTTTCAGAGGCTACGGGGGGAGGGGGATCTCCCTT
Cyclopterus lumpus genome assembly, chromosome: 6.
OY735153.1:25042200-25042217
GCTCGTGTTTACTAAATGCAATCTCACGCC25042200TTCTCTCGCGGCTGTTTCTTCCGGGTCATCTCTCCCGACCCTCCTGTC
CM0-CN0165-060401-809-b02 CN0165 Homo sapiens cDNA, mRNA sequence.
BG984585.1:17-34
TCTCAGGCTCTGTCTG17TTCTCTCGCGGCTGTTTCTCAGGCAGGCATGTTTCTCAGCCAGGATGT
Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:8242567-8242584
CTCTCTCTCTCTCTCTCTCCAGTTTCACGC8242567TTCTCTCGCGGCTGTTTCAGACTTAAGCTCGTCGCAAGCTCTGTCGCT
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:18209275-18209292
CTCCCTATCTCTTTATTTTGGTTGGGGAAG18209275TTCTCTCGCGGCTGTTTCAAAAGGCGGCTGCTACTAATTTGCTGGATG
Malus domestica genome assembly, chromosome: 5.
OU744546.1:9606471-9606488
CTCCCTATCTCTTTATTTTGGTTAGGGAAG9606471TTCTCTCGCGGCTGTTTCAAGAGGCGGCTGCTACTAATTTGCTGGATG
Persicaria maculosa genome assembly, chromosome: 10.
OY998260.1:13668225-13668242
CAAGTATTGTGAGAAACATGTGTAGCTTAC13668225TTCTCTCGCGGCTGTTTCAAACAAACGACCCCAAAATTTACCAATTGC
Microvirga ossetica strain V5/3M chromosome, complete sequence.
CP016616.1:500222-500239
GCCGGCCCGGCTTCCTCCTGCCCGTGCGCG500222TTCTCTCGCGGCTGTTTCGGCGGCTGTTCCTGTCAAAGCTCGCCGACG
Microvirga ossetica strain V5/3M plasmid unnamed1, complete sequence.
CP016617.1:1273140-1273157
GCCGGCCCGGCTTCCTCCTGCCCGTGCGCG1273140TTCTCTCGCGGCTGTTTCGGCGGCTGTTCCTGTCAAAGCTCGCCGACG
Caligus rogercresseyi isolate FCH chromosome 1.
CP045890.1:17686195-17686212
AAAAAGTTTGTTTAATAATTAAATAATATC17686195TTCTCTCGCGGCTGTTTCGGCGCGAACATCAATTCGTAGATAATAATA
Lumbricus rubellus genome assembly, chromosome: 13.
OX243823.1:31114351-31114368
ATACGAAGGCCTATTCGTGAAAATATTTAT31114351TTCTCTCGCGGCTGTTTCACAGTGTTTGGTTGGGGCAACTATCCATCT
Brachypalpus laphriformis genome assembly, chromosome: 1.
OX246753.1:256728320-256728337
ATTGGCCACCACTTCTGTACGGCCCAATCG256728320TTCTCTCGCGGCTGTTTCATCCCGTAGTTGGCTTGGAGAAGTTCTTTC
Pyrrhosoma nymphula genome assembly, chromosome: 6.
OY754333.1:153159033-153159050
TTCAATTCATTTCCTGCCGGGGCCGTTTTC153159033TTCTCTCGCGGCTGTTTCTACGTATTTAATCGCCGTTTAGCAAGGTAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAACAGCCGCGAGAGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAACAGCCGCGAGAGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.435 | 0.426 | search_plus_done; http://172.18.8.135:50400/match?q=GAAACAGCCGCGAGAGAA&k=0&no_gap=0&offset=0&limit=50
0.557 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=TTCTCTCGCGGCTGTTTC&k=0&no_gap=0&offset=0&limit=35
0.565 | 0.008 | cgi_end;

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