GGGenome | Results

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2025-04-12 10:47:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Lotus japonicus genomic DNA, chromosome 2, clone: LjT16L14, TM0383.
AP009672.1:51919-51938

TATATATATATATATATATATATATATTCT51919GAAACATCCCAGTCCAAGTCTCAAAGCAAGCCAACAATTTTCACCCTTTT

Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:58601153-58601172

TATATATATATATATATATATATATATTCT58601153GAAACATCCCAGTCCAAGTCTCAAAGCAAGCCAACAATTTTCACCCTTTT

Leuctra nigra genome assembly, chromosome: 5.
OW203766.1:38628864-38628883

AGTATAACAATTAACTTGGACTTGGACTTG38628864GACTTGGACTGGGATGTTTCTGCTCGGAGTTTCAGATGATTCGCCAGCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=GAAACATCCCAGTCCAAGTC&k=0&no_gap=0&offset=0&limit=50
0.135 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=GACTTGGACTGGGATGTTTC&k=0&no_gap=0&offset=0&limit=48
0.136 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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