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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:09:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

MAG: Melioribacteraceae bacterium isolate cMAG.6 chromosome, complete genome.
CP129490.1:572462-572481
GGAATGGCTTTTATAATTTTTTTAATTAAT572462GAAACCGGCGATGAAATTAGAAGACTACCAATAGCGGCACCACCAATTAC
Trifolium pratense cDNA clone:RCE22338.
BB916850.1:373-392
TCTACCGATTTCTTCCATCGGATATTGACC373GAAACCGGCGATGAAATTAGTTTGATTTCCCATGAAACAATAACCATCTC
Trifolium pratense cDNA clone:RCE23605.
BB917945.1:373-392
TCTACCGATTTCTTCCATCGGATATTGACC373GAAACCGGCGATGAAATTAGTTTGATTTCCCATGAAACAATAACCATCTC
Trifolium pratense cDNA clone:RCE34685.
BB925827.1:373-392
TCTACCGATTTCTTCCATCGGATATTGACC373GAAACCGGCGATGAAATTAGTTTGATTTCCCATGAAACAATAACCATCTC
TSA: Pisum sativum Ps_contig_mira-ass_35555 mRNA sequence.
JI931401.1:173-192
TCTTCCGATTTCCTCCATAGGGTATTGACC173GAAACCGGCGATGAAATTAGTTTGGTTTCCCATGAAACAATAACCATCTC
Trifolium subterraneum genome assembly, chromosome: 3.
OX637463.1:38698913-38698932
TCTACCAATTTCCTCCATCGGGTATTGTCC38698913GAAACCGGCGATGAAATTAGTTTGATTTCCCATGAAACAATAACCATCTC
Trifolium dubium genome assembly, chromosome: 9.
OX638070.1:9567391-9567410
TCTACCAATTTCCTCCATCGGATATTGACC9567391GAAACCGGCGATGAAATTAGTTTGATTTCCCATGAAAGAATAACCATCTC
Trifolium pratense cDNA clone:RCE27011.
BB920914.1:57-76
GAGATGGTTATTGTTTCATGGGAAATCAAA57CTAATTTCATCGCCGGTTTCGGTCAATATCCGATGGAAGAAATCGGTAGA
Trifolium pratense mRNA for BEL1-like homeodomain transcription factor, complete cds.
AB234880.1:1686-1705
GAGATGGTTATTGTTTCATGGGAAATCAAA1686CTAATTTCATCGCCGGTTTCGGTCAATATCCGATGGAAGAAATCGGTAGA
Trifolium dubium genome assembly, chromosome: 7.
OX638068.1:34889549-34889568
GAGATGGTTATTCTTTCATGGGAAATCAAA34889549CTAATTTCATCGCCGGTTTCGGTCAATATCCGATGGAGGAAATTGGTAGA
Nostoc sp. CENA543 chromosome, complete genome.
CP023278.1:6630045-6630064
GTCACCGTGTTTTCATGTCCTTCCAGCGTA6630045CTAATTTCATCGCCGGTTTCTAAGTTCCAGAGTTTGATAGTTTGGTCACG
Limnephilus marmoratus genome assembly, chromosome: Z.
OU862920.1:27498129-27498148
CATCAAATATTACAACGCATTTTATCATCA27498129CTAATTTCATCGCCGGTTTCATCGCTGTTTTCAGCAAATTTTTTTTCATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAACCGGCGATGAAATTAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAACCGGCGATGAAATTAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.200 | 0.191 | search_plus_done; http://172.18.8.135:50400/match?q=GAAACCGGCGATGAAATTAG&k=0&no_gap=0&offset=0&limit=50
0.322 | 0.123 | search_minus_done; http://172.18.8.135:50400/match?q=CTAATTTCATCGCCGGTTTC&k=0&no_gap=0&offset=0&limit=43
0.326 | 0.004 | cgi_end;

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