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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:02:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます(ミスマッチ挿入欠失

GA__Ed0070D11r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0070D11r, mRNA sequence.
BQ413160.1:47-66
TTTTTTTTTCCAACCATAACCTTATGAAAT47GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
GR__Ea26N01.f GR__Ea Gossypium raimondii cDNA clone GR__Ea26N01 5', mRNA sequence.
CO069983.1:1-20
1GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Ea49C02.f GR__Ea Gossypium raimondii cDNA clone GR__Ea49C02 5', mRNA sequence.
CO083853.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb0028D17.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0028D17 5', mRNA sequence.
CO101634.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb0028G11.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0028G11 5', mRNA sequence.
CO101684.1:8-27
ACCAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb0031J15.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0031J15 5', mRNA sequence.
CO103311.1:8-27
ACCAAAA8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb0031J23.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0031J23 5', mRNA sequence.
CO103318.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb0036J16.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0036J16 5', mRNA sequence.
CO106107.1:8-27
ACAAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb0042H19.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0042H19 5', mRNA sequence.
CO109864.1:11-30
CCTACAAAAA11GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb0044J15.f GR__Eb Gossypium raimondii cDNA clone GR__Eb0044J15 5', mRNA sequence.
CO110402.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb020I13.f GR__Eb Gossypium raimondii cDNA clone GR__Eb020I13 5', mRNA sequence.
CO118264.1:74-93
AAACTCATCACAACCATAAGCTTACGAAAT74GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb022C13.f GR__Eb Gossypium raimondii cDNA clone GR__Eb022C13 5', mRNA sequence.
CO119312.1:30-49
TTTTTTTTCCTTTAAGGTTTTTACGAAAT30GAAACGATTGGCTCCTTTCATCATTAAACATAAAATGTTAATCTCATATG
GR__Eb03K05.r GR__Eb Gossypium raimondii cDNA clone GR__Eb03K05 3', mRNA sequence.
CO122144.1:8-27
ACAAAAA8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb31J15.f GR__Eb Gossypium raimondii cDNA clone GR__Eb31J15 5', mRNA sequence.
CO130049.1:8-27
ACCAAAA8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb31J23.f GR__Eb Gossypium raimondii cDNA clone GR__Eb31J23 5', mRNA sequence.
CO130063.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
GR__Eb44J15.f GR__Eb Gossypium raimondii cDNA clone GR__Eb44J15 5', mRNA sequence.
CO132012.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
COT_DS_F05 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (NM_111817) putative adenosine kinase; protein id: At3g09820.1, mRNA sequence.
DT049901.1:5-24
TTTT5GAAACGATTGGCTCCTTTCATGAACTAAACATAAATGTTATTCTCATATG
COT_EB_C07 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' similar to (M88324) late embryogenesis-abundant protein [Gossypium hirsutum], mRNA sequence.
DT050578.1:6-25
GAAAT6GAAACGATTGGCTCCTTTCATGAATAAACATAAATGTTATTCTCATATGC
rayctn0_0005_E12.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO089617.1:6-25
GAAAT6GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATACG
rayctn0_0012_A10.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO090125.1:12-31
CTTCACGAAAT12GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
rayctn0_0063_C12.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO094034.1:6-25
GGAAT6GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
ps_01_H08.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO104331.1:6-25
GAAAT6GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
rmhcyd0_000296.y1.scf cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO104606.1:7-26
GGGAAT7GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
rcrycc0_0003_C01.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO106776.1:11-30
CTCACGAAAT11GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
rcrycc0_0003_C11.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO106785.1:11-30
CTCACGAAAT11GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
rcrycc0_0044_A03.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO109831.1:3-22
AT3GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
rcrycc0_0053_A09.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO110592.1:10-29
CTGCGAAAT10GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
B02_51741.14.S1108272589.LDYN1-11438.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ111503.1:159-178
AAACTCATCTCAACCATAAGCTTATGAAAT159GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
B05_51716.17.S1108264103.LDYN1-11153.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ111798.1:44-63
AAACTCATCTCAACCATAAGCTTATGAAAT44GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
C04_51750.28.S1108273467.LDYN1-12316.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ112913.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
D01_51704.37.S1108262971.LDYN1-10021.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ113816.1:44-63
AAACTCATCACAACCATAAGCTTACGAAAT44GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
E05_51545.53.S1108222148.LDYN1-4565.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ115374.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
E10_51489.58.S1108193525.LDYN1-1978.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ115864.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
G02_51396.74.S1108173225.LDYN1-74.M13-R.ab1 Gossypium hirsutum L. cotton leaves cDNA library Gossypium hirsutum cDNA 3', mRNA sequence.
JZ117465.1:8-27
ACGAAAT8GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
Gossypium raimondii isolate D5-4 chromosome D5_09.
CP032561.1:35191995-35192014
AAACTCATCACAACCATAAGCTTACGAAAT35191995GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTAATCTCATATG
Gossypium herbaceum isolate GPA1alz chromosome 9.
CP106708.1:75534443-75534462
AAACTCATCTCAACCATAAGCTTATGAAAT75534443GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
Gossypium bickii isolate GPG1lz chromosome 9.
CP106720.1:85196156-85196175
AAACTCATCTCAACCATAAGCTTATGAAAT85196156GAAACGATTGGCTCCTTTCATGAATAAACATAAAATGTTATTCTCATATG
Eutrigla gurnardus genome assembly, chromosome: 16.
OY741279.1:8116952-8116971
TGGACTATTACAAATCCAATATTCAAGGTA8116952TGAAAGGAGCCAATCGTTTCAGTCGTGATCACCAATATCTGGACTTTGTG
Sequence 19869 from patent US 7557201.
GP488872.1:485-504
CATATGAGAATAACATTTTATGTCTATTCA485TGAAAGGAGCCAATCGTTTCATTTCATAAGCTTATGGTTGAGAT
BNLGHi7674 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to (Y15430) adenosine kinase [Physcomitrella patens], mRNA sequence.
AI730683.1:594-613
CATATGAGAATAACATTTTATGTTTATTCA594TGAAAGGAGCCAATCGTTTCATTTCATAAGCTTATGGTTGAGATGAGTTT
GA__Eb0008G07f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0008G07f, mRNA sequence.
BF270429.1:418-437
CATATGAGAATAACATTTTATGTTTATTCA418TGAAAGGAGCCAATCGTTTCAAAAAAAAAAAANAAAA
GA__Eb0014E17f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0014E17f, mRNA sequence.
BF272229.1:142-161
CATATGAGAATAACATTTTATGTTTATTCA142TGAAAGGAGCCAATCGTTTCATTTCATAAGCTTATGGTTGAGATGAGTTT
GA__Eb0023D24f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0023D24f, mRNA sequence.
BF275144.1:231-250
CATATGAGAATAACATTTTATGTTTATTCA231TGAAAGGAGCCAATCGTTTCATTTCATAAGCTTATGGTTGAGATGAGTTT
GH_FFF_01-01-07R_A07_InvR_26Mar04_063_F.x fiber-five days after anthesis Gossypium hirsutum cDNA, mRNA sequence.
DW008484.1:580-599
CATATGAGAATAACATTTTATGTTTATTCA580TGAAAGGAGCCAATCGTTTCATTTCATAAGCTTATGGTTGAGATGAGTTT
GH_HYPS_01-01-09R_H12_InvR_14Apr04_082_F Stem - 7 weeks after planting Gossypium hirsutum cDNA, mRNA sequence.
DW224407.1:580-599
CATATGAGAATAACATTTTATGTTTATTCA580TGAAAGGAGCCAATCGTTTCATTTCC
GH_TMIRS_201_E03_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence.
DW516426.1:406-425
CATATGAGAATAACATTTTATGTTTATTCA406TGAAAGGAGCCAATCGTTTCATTTCATAAGCTTATGGTTGAGAG
EST723 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 10-d1 5', mRNA sequence.
EE593121.1:483-502
CATATGAGAATAACATTTTATGTTTATTCA483TGAAAGGAGCCAATCGTTTCATTTCGTAAAAAAAAAAAAAAAAAAAAAAA
UFL_071_14 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES840891.1:685-704
CATATGAGAATAACATTTTATGTTTATTCA685TGAAAGGAGCCAATCGTTTCATTTCATAAGCTTATGGTTGAGATGAGTTT
EST003401 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 13-O15 5', mRNA sequence.
GR710201.1:274-293
CATATGAGAATAACATTTTATGTTTATTCA274TGAAAGGAGCCAATCGTTTCATTTCGTAAGCTTATGGTTGTGATGAGTTT
Gossypium turneri isolate D10-2 chromosome D10_09.
CP032579.1:8453429-8453448
CATATGAGAATAACATTTTATGTTTATTCA8453429TGAAAGGAGCCAATCGTTTCATTTCGTAAGCTTATGGTTGTGATGAGTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAACGATTGGCTCCTTTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAACGATTGGCTCCTTTCA | format : html | download : | debug :

0.014 | 0.014 | search_start;
2.869 | 2.854 | search_plus_done; http://172.18.8.135:50400/match?q=GAAACGATTGGCTCCTTTCA&k=0&no_gap=0&offset=0&limit=50
3.395 | 0.526 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAAGGAGCCAATCGTTTC&k=0&no_gap=0&offset=0&limit=13
3.404 | 0.009 | cgi_end;

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