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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 16:41:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pyrus pyrifolia mRNA, clone: NFR2_07_02, 3' end sequence, expressed in fruit.
HX739768.1:551-574
TTAGATTAAACTAAGCTGGACTAGTTTAGT551GAAACGTTTGGTGCAATATCAGACAAAACTACACACTAATTATTTATTATTATT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:28970334-28970357
GCTGCAGGGACTAAGTTGGACTAGCTTAGT28970334GAAACGTTTGGTGCAATATCAGACTAAGAAGCAGGATAATGAAGAAAGAAAAAA
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:7847686-7847709
TTGGCATGGACTAAGTAGTATAAAGATAAT7847686GAAACGTTTGGTGCAATATCAGACTAAATTACGGACTCAATTATTTTTGCAGAT
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:7963465-7963488
TTGGCATGGACTAAGTAGTATAAAGATAAT7963465GAAACGTTTGGTGCAATATCAGACTAAATTACGGACTCAATTATTTTTGCAGAT
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH018_03702m, 5' end sequence.
AB450703.1:178-201
AATAATAATAAATAATTAGTGTGTAGTTTT178GTCTGATATTGCACCAAACGTTTCACTAAACTAGTCCAGCTTAGTTTAATCTAA
Pyrus pyrifolia mRNA, clone: NFR2_07_02, 5' end sequence, expressed in fruit.
HX748834.1:114-137
AATAATAATAAATAATTAGNGTGTAGTTTT114GTCTGATATTGCACCAAACGTTTCACTAAACTAGTCCAGCTTAGTTTAATCTAA
TSA: Pyrus pyrifolia mRNA, contig: contig_7392.
FX433749.1:182-205
AATAATAATAAATAATTAGTGTGTAGTTTT182GTCTGATATTGCACCAAACGTTTCACTAAACTAGTCCAGCTTAGTTTAATCTAA

Data Export:

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