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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-05 19:31:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Human DNA sequence from clone RP11-402P6 on chromosome X.
BX276092.9:94841-94860
TCTGTACGCTGGAAACTATAAAACACTGAT94841GAAAGAAGTTGAGGAAGCCACAAATAAATGGAAAGCTATCCAATGATTAT
Homo sapiens isolate CHM13 chromosome X.
CP068255.2:70179979-70179998
TCTGTACGCTGGAAACTATAAAACACTGAT70179979GAAAGAAGTTGAGGAAGCCACAAATAAATGGAAAGCTATCCAATGATTAT
Homo sapiens isolate NA24385 chromosome X.
CP086568.2:70236953-70236972
TCTGTACGCTGGAAACTATAAAACACTGAT70236953GAAAGAAGTTGAGGAAGCCACAAATAAATGGAAAGCTATCCAATGATTAT
Homo sapiens isolate NA24385 chromosome X.
CP139511.1:70232708-70232727
TCTGTACGCTGGAAACTATAAAACACTGAT70232708GAAAGAAGTTGAGGAAGCCACAAATAAATGGAAAGCTATCCAATGATTAT
Macaca mulatta clone BAC CH250-236O7 chromosome X sequence, complete sequence.
AC280541.1:85464-85483
TCTGTACACTGGAAACTATAAAACACTGAT85464GAAAGAAGTTGAGGAAGCCACAGATAAATGGAAAGCTATCCAACGATTAT
Mus musculus BAC clone RP23-251N2 from chromosome 18, complete sequence.
AC132418.3:55437-55456
AAATAAAAGTTGATAGTAGAAAGAATATAA55437GAAAGAAGTTGAGGAAGCCACTAAACAGTTGGGACAGGAGATAGATAACA
Apodemus sylvaticus genome assembly, chromosome: 13.
OX359310.1:23326029-23326048
AATTCTTAGTTGATAGCAGAAAGATTATAA23326029GAAAGAAGTTGAGGAAGCCATTTAATAGTTGGGATAGGAGAGAAATAACA
JP 2014500723-A/8980: Polycomb-Associated Non-Coding RNAs.
LF201477.1:38864-38883
AAATAAAAGTTGATAGTAGAAAGAATATAA38864GAAAGAAGTTGAGGAAGCCACTAAACAGTTGGGACAGGAGATAGATAACA
JP 2018138019-A/8980: Polycomb-Associated Non-Coding RNAs.
MA437054.1:38864-38883
AAATAAAAGTTGATAGTAGAAAGAATATAA38864GAAAGAAGTTGAGGAAGCCACTAAACAGTTGGGACAGGAGATAGATAACA
Sequence 8980 from patent US 10119144.
MM229821.1:38864-38883
AAATAAAAGTTGATAGTAGAAAGAATATAA38864GAAAGAAGTTGAGGAAGCCACTAAACAGTTGGGACAGGAGATAGATAACA
Eukaryotic synthetic construct chromosome X.
CP034509.1:70906095-70906114
TCTGTACGCTGGAAACTATAAAACACTGAT70906095GAAAGAAGTTGAGGAAGCCACAAATAAATGGAAAGCTATCCAATGATTAT
Eukaryotic synthetic construct chromosome X.
CP034534.1:70906095-70906114
TCTGTACGCTGGAAACTATAAAACACTGAT70906095GAAAGAAGTTGAGGAAGCCACAAATAAATGGAAAGCTATCCAATGATTAT
ZM311 Zostera marina cDNA library of leaf treated by salt stress Zostera marina cDNA, mRNA sequence.
HS090262.1:338-357
CTTTCCCAACAGGATCCGGGAAGAAGAGAG338GAAAGAAGTTGAGGAAGCCAGATATAGTTAAATTCCCACTAAAACTGAAA
TSA: Cannabis sativa PK15972.1_1.CasaPuKu mRNA sequence.
JP449819.1:838-857
GCTTAGGTACTTTTACAAGGTTCATAAGTT838GAAAGAAGTTGAGGAAGCCAGAGTAAATCTCGTGAGGAGAGCGATTTCAG
Pan troglodytes clone CH251-514B7, WORKING DRAFT SEQUENCE.
AC280488.1:84485-84504
TCTGTACGCTGGAAACTATAAAACACTGAT84485GAAAGAAGTTGAGGAAGCCACAAATAAATGGAAAGCTATCCAATGATTAT
Ailanthus altissima genome assembly, chromosome: 13.
OX327695.1:8577868-8577887
AAGCCCAACCCCATTAGAAAAAGATAAACA8577868GAAAGAAGTTGAGGAAGCCAAAAAGGCAAGGCAAGTAGACCACTTAAAGT
Tachina lurida genome assembly, chromosome: 1.
OX101752.1:103423152-103423171
AAATATCTGTCCATACAAAGAAAATATTTT103423152GAAAGAAGTTGAGGAAGCCAAAAAGCGTAAGGAGGATGAACGCCTTAAGA
Galaxea fascicularis genome assembly, chromosome: 3.
OX419337.1:14785179-14785198
AATACAACAGGAGGAACTAACAAGGAAGGT14785179GAAAGAAGTTGAGGAAGCCAAAGCCAGCTCAAATCATGGTGCTGCATGGA
Protophormia terraenovae genome assembly, chromosome: 1.
OX596073.1:101200527-101200546
AAACATCTGTCCGTTCAAGGAAGATATTTT101200527GAAAGAAGTTGAGGAAGCCAAGAAGCGCAAGGAAGAGGAACGCCTAAAAA
Cepaea hortensis genome assembly, chromosome: 11.
OY992886.1:98546481-98546500
AGCATTAGAAAGGCAACATCAAAAAGAGAT98546481GAAAGAAGTTGAGGAAGCCACCAAACGAAAACAGCTAGATTTAGATCATG
Cepaea hortensis genome assembly, chromosome: 17.
OY992892.1:96871331-96871350
GGCATTAGAAAGACAGCATAAAAAAAAATT96871331GAAAGAAGTTGAGGAAGCCACCAAACAAAAGCAGATACAAGTAGAGTCAG
Human DNA sequence from clone RP11-402P6 on chromosome X.
BX276092.9:83863-83882
ATAATCATTGGATAGCTTTCCATTTATTTG83863TGGCTTCCTCAACTTCTTTCATCAGTGTTTTATAGTTTCCAGCGTACAGA
Homo sapiens isolate CHM13 chromosome X.
CP068255.2:70168631-70168650
ATAATCATTGGATAGCTTTCCATTTATTTG70168631TGGCTTCCTCAACTTCTTTCATCAGTGTTTTATAGTTTCCAGCGTACAGA
Homo sapiens isolate NA24385 chromosome X.
CP086568.2:70225949-70225968
ATAATCATTGGATAGCTTTCCATTTATTTG70225949TGGCTTCCTCAACTTCTTTCATCAGTGTTTTATAGTTTCCAGCGTACAGA
Homo sapiens isolate NA24385 chromosome X.
CP139511.1:70221714-70221733
ATAATCATTGGATAGCTTTCCATTTATTTG70221714TGGCTTCCTCAACTTCTTTCATCAGTGTTTTATAGTTTCCAGCGTACAGA
Macaca mulatta clone BAC CH250-236O7 chromosome X sequence, complete sequence.
AC280541.1:57315-57334
ATAATCGTTGGATAGCTTTCCATTTATCTG57315TGGCTTCCTCAACTTCTTTCATCAGTGTTTTATAGTTTCCAGTGTACAGA
Mus musculus genome assembly, chromosome: 18.
OW971560.1:70672524-70672543
TGTTATCTATCTCCTGTCCCAACTGTTTAG70672524TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OW971591.1:71279402-71279421
TGTTATCTATCTCCTGTCCCAACTGTATAG71279402TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTGCTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OW971612.1:71122620-71122639
TGTTATCTATCTCCTGTCCCAACTGTTTAG71122620TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus domesticus genome assembly, chromosome: 18.
OW971622.1:70728455-70728474
TGTTATCTATCTCCTGTCCCAACTGTTTAG70728455TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OW971654.1:71753988-71754007
TGTTATCTATCTCCTGTCCCAACTGTTTAG71753988TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus molossinus genome assembly, chromosome: 18.
OW971675.1:71089151-71089170
TGTTATCTATCTCCTGTCCCAACTGTATAG71089151TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTGCTATCAACTTTTATTT
Mus spretus genome assembly, chromosome: 18.
OW971696.1:71741646-71741665
TGTTATGTATCTCCTGTCCCAACTGTTTAG71741646TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTGTTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OW971708.1:70639066-70639085
TGTTATCTATCTCCTGTCCCAACTGTTTAG70639066TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OW971738.1:71129279-71129298
TGTTATCTATCTCCTGTCCCAACTGTTTAG71129279TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OW971759.1:71175289-71175308
TGTTATCTATCTCCTGTCCCAACTGTTTAG71175289TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus musculus genome assembly, chromosome: 18.
OW971780.1:71518247-71518266
TGTTATCTATCTCCTGTCCCAACTGTATAG71518247TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTGCTATCAATTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OW971801.1:70920913-70920932
TGTTATCTATCTCCTGTCCCAACTGTTTAG70920913TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OW971822.1:71185508-71185527
TGTTATCTATCTCCTGTCCCAACTGTATAG71185508TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTGCTATCAACTTTTATTT
Mus musculus castaneus genome assembly, chromosome: 18.
OW971834.1:70255516-70255535
TGTTATCTATCTCCTGTCCCAACTGTTTAG70255516TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTGCTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OW971853.1:71321817-71321836
TGTTATCTATCTCCTGTCCCAACTGTATAG71321817TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTGCTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OX389812.1:73103340-73103359
TGTTATCTATCTCCTGTCCCAACTGTTTAG73103340TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OX390161.1:73253480-73253499
TGTTATCTATCTCCTGTCCCAACTGTTTAG73253480TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Mus musculus genome assembly, chromosome: 18.
OX439032.1:73121309-73121328
TGTTATCTATCTCCTGTCCCAACTGTTTAG73121309TGGCTTCCTCAACTTCTTTCTTATATTCTTTCTACTATCAACTTTTATTT
Chionomys nivalis genome assembly, chromosome: 8.
OX465456.1:71668141-71668160
ATGGGCTTTGCAGTCAGTGGAGAAGAGTGT71668141TGGCTTCCTCAACTTCTTTCTTGCCTGTCAACCATTCCACGCTCATAAGA
Lutra lutra genome assembly, chromosome: 13.
LR738415.1:47464919-47464938
ATGAGCATGGAACATTTTTGCATTTCTTTG47464919TGGCTTCCTCAACTTCTTTCATGAATATTCTGTAGTTTTCTGAGTACAGA
Syntrophales bacterium isolate 28fc5764-0b9a-428c-a12f-8ca866e14e1d genome assembly, chromosome: 1.
OY764159.1:4402069-4402088
TTTTCTGGGATTGGCCGGTTAAGATCTTCC4402069TGGCTTCCTCAACTTCTTTCGTCAGCTTCTCATTAAAGCTTTCAATGATC
Eukaryotic synthetic construct chromosome X.
CP034509.1:70895117-70895136
ATAATCATTGGATAGCTTTCCATTTATTTG70895117TGGCTTCCTCAACTTCTTTCATCAGTGTTTTATAGTTTCCAGCGTACAGA
Eukaryotic synthetic construct chromosome X.
CP034534.1:70895117-70895136
ATAATCATTGGATAGCTTTCCATTTATTTG70895117TGGCTTCCTCAACTTCTTTCATCAGTGTTTTATAGTTTCCAGCGTACAGA
Pan troglodytes clone CH251-514B7, WORKING DRAFT SEQUENCE.
AC280488.1:71940-71959
ATAATCATTGGATAGCTTTCCATTTATTTG71940TGGCTTCCTCAACTTCTTTCATCAGTGTTTTATAGTTTCCAGCGTACAGA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 10.
CP124710.1:100689377-100689396
GTCTCGGGGATTTTTCACACATAGCTCTCA100689377TGGCTTCCTCAACTTCTTTCTTCATTTTTTTCCCCTCTACATAGACTTGG
Galaxea fascicularis genome assembly, chromosome: 2.
OX419336.1:16645439-16645458
TCCATGCAGCACCATGATTTGAGCTGGCGT16645439TGGCTTCCTCAACTTCTTTCACCTTCCTTGTTAGTTCCTCCTGTTGTATT
Galaxea fascicularis genome assembly, chromosome: 3.
OX419337.1:12244022-12244041
TCCATGCAGCACCATGATTTGAGCTGGCGT12244022TGGCTTCCTCAACTTCTTTCACCTTCCTTGTTAGTTCCTCCTGTTGTATT
Galaxea fascicularis genome assembly, chromosome: 6.
OX419340.1:4747962-4747981
TCCATGCAGCACCATGATTTGAGCTGGCGT4747962TGGCTTCCTCAACTTCTTTCACCTTCCTAATTTTTATAATTAATTTTTAT
Galaxea fascicularis genome assembly, chromosome: 6.
OX419340.1:23846636-23846655
TCCATGCAGCACCATGATTTGAGCTGGCGT23846636TGGCTTCCTCAACTTCTTTCACCTTCCTTGTTAGTTCCTCCTGTTGTGTT
Dysidea avara genome assembly, chromosome: 3.
OY787648.1:44252825-44252844
CTTCTTTTCTGGCTTTATCTGCTTCACTGC44252825TGGCTTCCTCAACTTCTTTCTCAGCTTGTTTCAACTTTCTCTCAGTTCTG
Cepaea hortensis genome assembly, chromosome: 16.
OY992891.1:56051136-56051155
CATGATCTAAATCTAGCTGTCTTTGTTTGG56051136TGGCTTCCTCAACTTCTTTCATTTCTTTTTGATGTTGTCTTTCCAATGCT
Cepaea hortensis genome assembly, chromosome: 20.
OY992895.1:3287235-3287254
CATTATCTAACTCTAGCTGTTTTCGTTTGG3287235TGGCTTCCTCAACTTCTTTCATCTCTTTTTGGTGTTGCCTTTCTAATGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAAGAAGTTGAGGAAGCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAAGAAGTTGAGGAAGCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.718 | 0.709 | search_plus_done; http://172.18.8.135:50400/match?q=GAAAGAAGTTGAGGAAGCCA&k=0&no_gap=0&offset=0&limit=50
0.871 | 0.153 | search_minus_done; http://172.18.8.135:50400/match?q=TGGCTTCCTCAACTTCTTTC&k=0&no_gap=0&offset=0&limit=29
0.895 | 0.024 | cgi_end;

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