GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-01-10 17:32:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

PP_LBa0026-F08.R PP_LBa Prunus persica genomic 3', genomic survey sequence.
FI964094.1:18-41
ATGTTTGGCACCATACG18GAAAGCAAAAAGAAAATCTCCATTGGCATCATTAGAAAAGCAAAATCAAACTTC
PP_LBa0010-L03.F PP_LBa Prunus persica genomic 5', genomic survey sequence.
FI974132.1:227-250
GAAGTTTGATTTTGCTTTTCTAATGATGCC227AATGGAGATTTTCTTTTTGCTTTCCGTATGGTGCCAAACATGATCCCACTTTCT
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:34409-34432
GAAGTTTGATTTTGCTTTTCTAATGATGCC34409AATGGAGATTTTCTTTTTGCTTTCCGTATGGTGCCAAACATGATCCCACTTTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAAAGCAAAAAGAAAATCTCCATT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAAGCAAAAAGAAAATCTCCATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.122 | 0.113 | search_plus_done; http://172.18.8.135:50400/match?q=GAAAGCAAAAAGAAAATCTCCATT&k=0&no_gap=0&offset=0&limit=50
0.185 | 0.063 | search_minus_done; http://172.18.8.135:50400/match?q=AATGGAGATTTTCTTTTTGCTTTC&k=0&no_gap=0&offset=0&limit=49
0.186 | 0.001 | cgi_end;

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