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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-12-17 09:05:49, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 2 from Patent WO2011028120.
JA063107.1:1-22
1GAAAGTAAGGCACGTTGGCAAT
EST329139 tomato germinating seedlings, TAMU Solanum lycopersicum cDNA clone cLEI13D22 5', mRNA sequence.
AW650685.1:437-458
GATGAAGCTGATGTGCTGCAGCTACCCTCC437GAAAGTAAGGCACGTTGGCAATAGGCCCTACGGGAAATCTCTTATGAACCAG
EST340461 tomato fruit mature green, TAMU Solanum lycopersicum cDNA clone cLEF40I1 5', mRNA sequence.
AW930004.1:476-497
GATGAAACTGATGTGCTGCAGCTACCCTCC476GAAAGTAAGGCACGTTGGCAATAGGCCCTACGGGAAATCTCTTATGAACCAG
cC-esflcLEL16F14d1 Tomato flower library from a mixture of developmental stages Solanum lycopersicum cDNA clone cC-esflcLEL16F14d1, mRNA sequence.
BG627147.1:284-305
GATGAAGCTGATGTGCTGCAGCTACCCTCC284GAAAGTAAGGCACGTTGGCAATAGGCCCTACGGGAAATCTCTTATGAACCAG
EST617383 Generation of a set of potato cDNA clones for microarray analyses mixed potato tissues Solanum tuberosum cDNA clone STMHG69 3' end, mRNA sequence.
BQ509968.2:187-208
GATGAAGCTGATGTGCAGCAGCTACCCTCC187GAAAGTAAGGCACGTTGGCAATAGGCCCTACGGGGAATCTCTTATGAACCAG
EST710805 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POABU43 3' end, mRNA sequence.
CK264727.1:245-266
GATGAAGCTGATGTGCAGCAGCTACCCTCC245GAAAGTAAGGCACGTTGGCAATAGGCCCTACAGGGAATCTCTTATGAACCAG
EST721364 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADM45 3' end, mRNA sequence.
CK275286.1:281-302
GATGAAGCTGATGTGCAGCAGCTACCCTCC281GAAAGTAAGGCACGTTGGCAATAGGCCCTACGGGGAATCTCTTATGAACCAG
31016.3 In vitro Root Solanum tuberosum cDNA clone 31016 3', mRNA sequence.
DN905762.1:371-392
GATGAAGCTGATGTGCAGCAGCTACCCTCC371GAAAGTAAGGCACGTTGGCAATAGGCCCTACGGGGAATCTCTTATGAACCAG
Solanum tuberosum cultivar P8 chromosome 3.
CP046682.1:43916398-43916419
YTRTTACCTGATGTGCWGCAGCTACCCTCC43916398GAAAGTAAGGCACGTTGGCAATAGGCCCTACAGGGAATCTCTTRTGAACCAG
Solanum tuberosum cultivar MSH/14-112 chromosome 3.
CP046696.1:43931401-43931422
TTGTTACCTGATGTGCWGCAGCTACCCTCC43931401GAAAGTAAGGCACGTTGGCAATAGGCCCTACAGGGAATCTCTTRTGAACCAG
Solanum pinnatisectum cultivar CGN17745 chromosome 3.
CP047566.1:43902762-43902783
CTATTACCTGATGTGCTGCAGCTACCCTCC43902762GAAAGTAAGGCACGTTGGCAATAGGCCCTACTGGGAATCTCTTGTGAACCAG
Solanum tuberosum cultivar Solyntus chromosome 3.
CP055236.1:46583938-46583959
TTGTTACCTGATGTGCAGCAGCTACCCTCC46583938GAAAGTAAGGCACGTTGGCAATAGGCCCTACAGGGAATCTCTTATGAACCAG
Solanum verrucosum cultivar 11H23 chromosome 3.
CP133614.1:41910970-41910991
TTGTTACCTGATGTGCAGCAGCTACCCTCC41910970GAAAGTAAGGCACGTTGGCAATAGGCCCTACGGGGAATCTCTTATGAACCAG
Sequence 83 from Patent WO2004018695.
CQ788413.1:791-812
CTGGTTCATAAGAGATTTCCCGTAGGGCCT791ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
Sequence 161 from Patent WO2004018693.
CQ793639.1:771-792
CTGGTTCATAAGAGATTTCCCGTAGGGCCT771ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
Sequence 5 from Patent WO2005019467.
CS039052.1:763-784
CTGGTTCATAAGAGATTTCCCGTAGGGCCT763ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
Sequence 121 from Patent WO2005019467.
CS039168.1:771-792
CTGGTTCATAAGAGATTTCCCGTAGGGCCT771ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
Sequence 47 from Patent WO2005019461.
CS046354.1:763-784
CTGGTTCATAAGAGATTTCCCGTAGGGCCT763ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
Sequence 51 from Patent WO2005019460.
CS050465.1:763-784
CTGGTTCATAAGAGATTTCCCGTAGGGCCT763ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
JP 2007502605-A/3: Method for producing ketocarotinoids in genetically modified, non-human organisms.
DJ009116.1:763-784
CTGGTTCATAAGAGATTTCCCGTAGGGCCT763ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
JP 2007502605-A/77: Method for producing ketocarotinoids in genetically modified, non-human organisms.
DJ009190.1:771-792
CTGGTTCATAAGAGATTTCCCGTAGGGCCT771ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
Solanum tuberosum EST, clone 3J11.
AM908153.1:250-271
CTGGTTCATAAGAGATTCCCCGTAGGGCCT250ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCTGCACATCAGCTTCATC
EST710804 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POABU43 5' end, mRNA sequence.
CK264726.1:805-826
CTGGTTCATAAGAGATTCCCTGTAGGGCCT805ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCTGCACATCAGCTTCATC
EST721363 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADM45 5' end, mRNA sequence.
CK275285.1:806-827
CTGGTTCATAAGAGATTCCCCGTAGGGCCT806ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCTGCACATCAGCTTCATC
EST722319 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POADS29 5' end, mRNA sequence.
CK276241.1:801-822
CTGGTTCATAAGAGATTCCCTGTAGGGCCT801ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCTGCACATCAGCTTCATC
Solanum lycopersicum cDNA, clone: FC02AE02, HTC in fruit.
AK246159.1:819-840
CTGGTTCATAAGAGATTTCCCGTAGGGCCT819ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
Solanum lycopersicum Micro-Tom DNA, chromosome 3, draft genome sequence.
AP028937.1:3311280-3311301
CTGGTTCATAAGAGATTTCCCGTAGGGCCT3311280ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGGTAATAA
Solanum lycopersicum cultivar I-3 chromosome 3.
CP023759.1:2450151-2450172
CTGGTTCATAAGAGATTTCCCGTAGGGCCT2450151ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGGTAATAA
Lycopersicon esculentum chromoplast beta-carotene hydroxylase gene, complete cds; nuclear gene for chromoplast product.
DQ650804.1:1810-1831
CTGGTTCATAAGAGATTTCCCGTAGGGCCT1810ATTGCCAACGTGCCTTACTTTCGAAGGGTAGCTGCAGCACATCAGGTAATAA
Lycopersicon esculentum carotene beta-hydroxylase (CrtR-b2) mRNA, complete cds.
DQ864755.1:763-784
CTGGTTCATAAGAGATTTCCCGTAGGGCCT763ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC
Solanum phureja x Solanum tuberosum beta-carotene hydroxylase (CrtR-b2) mRNA, CrtR-b2-B allele, complete cds.
GU233534.1:763-784
CTGGTTCATAAGAGATTCCCCGTAGGGCCT763ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCTGCACATCAGCTTCATC
Solanum lycopersicum chromosome ch03, complete genome.
HG975515.1:2450036-2450057
CTGGTTCATAAGAGATTTCCCGTAGGGCCT2450036ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGGTAATAA
Solanum tuberosum beta-carotene hydroxylase 2 (CHY2) gene, complete cds.
HM013963.1:1449-1470
CTGGTTCATAAGAGATTCCCTGTAGGGCCT1449ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCTGCACATCAGGTAACAA
Solanum chacoense beta-carotene hydroxylase 2 (CHY2) gene, partial cds.
OR393244.1:287-308
CTGGTTCATAAGAGATTCCCCGTAGGGCCT287ATTGCCAACGTGCCTTACTTTC
Solanum lycopersicum genome assembly, chromosome: 3.
OU640346.1:2667343-2667364
CTGGTTCATAAGAGATTTCCCGTAGGGCCT2667343ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGGTAATAA
Lycopersicon esculentum partial mRNA for beta-carotene hydroxylase (CrtR-b2 gene).
Y14810.2:763-784
CTGGTTCATAAGAGATTTCCCGTAGGGCCT763ATTGCCAACGTGCCTTACTTTCGGAGGGTAGCTGCAGCACATCAGCTTCATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAAGTAAGGCACGTTGGCAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAAGTAAGGCACGTTGGCAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.462 | 0.453 | search_plus_done; http://172.18.8.135:50800/match?q=GAAAGTAAGGCACGTTGGCAAT&k=0&no_gap=0&offset=0&limit=50
0.737 | 0.276 | search_minus_done; http://172.18.8.135:50800/match?q=ATTGCCAACGTGCCTTACTTTC&k=0&no_gap=0&offset=0&limit=37
0.752 | 0.015 | cgi_end;

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