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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 18:17:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Podarcis cretensis genome assembly, chromosome: 1.
OX638149.1:70748786-70748805
TTTGCTAGTAAAACTGAATTACTATGTCGC70748786GAAATGATGCATGGGCTTTGAAGAGAAGAAAGAGAATGTGTTCTGAATAT
RS2A936JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EW728454.1:147-166
TAGTAAAAATCTATTTGTACTGCTGAAGAT147GAAATGATGCATGGGCTTTGGGAATAATTAACGTAGTCTTTTTTCTTTCT
RR1D702JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EY893647.1:161-180
TAGTAAAAATCTATTTGTACTGCTGAAGAT161GAAATGATGCATGGGCTTTGGGAATAATTAACGTAGTCTTTTTTTCTTTC
RS2EZ86JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
FD573446.1:114-133
TAGTAAAAATCTATTTGTACTGCTGAAGAT114GAAATGATGCATGGGCTTTGGGAATAATTAACGTAGTCTTTTTTCTTTCT
RS2FL54JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
FD574931.1:158-177
TAGTAAAAATCTATTTGTACTGCTGAAGAT158GAAATGATGCATGGGCTTTGGGAATAATTAACGTAGTCTTTTTTCTTTCT
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:40369049-40369068
AAGTGAAAATCCATTTGTAATGCTGAAGAT40369049GAAATGATGCATGGGCTTTGGGAATAGTTAACGTGGTCTTTTTTCTTTCT
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:40369049-40369068
AAGTGAAAATCCATTTGTAATGCTGAAGAT40369049GAAATGATGCATGGGCTTTGGGAATAGTTAACGTGGTCTTTTTTCTTTCT
Podarcis lilfordi genome assembly, chromosome: 1.
OX395126.1:69029505-69029524
ATATTCAGAACACATTCTCTTTCTTCTCTT69029505CAAAGCCCATGCATCATTTCGCGACATAGTAATTCAGTTTTACTAGCAAA
Gobius niger genome assembly, chromosome: 20.
OX637614.1:9574305-9574324
ACAGGAGTGCTTATGGATACCTGACCGACT9574305CAAAGCCCATGCATCATTTCTCATGCAAACATTAGGCCTGGCTGTAATCA
Psittacula echo genome assembly, chromosome: 1.
OY725420.1:7263035-7263054
CACAAGCACAGACTTCAAAGCTAGTCTTAG7263035CAAAGCCCATGCATCATTTCAATGATAGCAGAAGTGTGAAGAGGGACTGA
RS2A936TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW723808.1:652-671
AGAAAGAAAAAAGACTACGTTAATTATTCC652CAAAGCCCATGCATCATTTCATCTTCAGCAGTACAAATAGATTTTTACTA
RR1D702TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EY897281.1:691-710
AGAAAGAAAAAAGACTACGTTAATTATTCC691CAAAGCCCATGCATCATTTCATCTTCAGCAGTACAATAG
RS2FL54TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD571017.1:683-702
AAGAAAGAAAAAGACTACGTTAATTATTCC683CAAAGCCCATGCATCATTTCATCTTCAGCAGTACAAATAGATTTTACTAT
Paenibacillus psychroresistens strain ML311-T8 chromosome, complete genome.
CP034235.1:6022208-6022227
AAGTCCACTTGCCATACAATCTACATCCGC6022208CAAAGCCCATGCATCATTTCCAATAAACATCCGCTTAAAGCCTTTATCAT
Megachile willughbiella genome assembly, chromosome: 13.
OX243806.1:7130323-7130342
AACACCGTCAGTTTCAAACGTTCCGTCGAT7130323CAAAGCCCATGCATCATTTCCCCTTCGGTTCATTGAATCAAAAACAAGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAATGATGCATGGGCTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAATGATGCATGGGCTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.474 | 0.465 | search_plus_done; http://172.18.8.135:50400/match?q=GAAATGATGCATGGGCTTTG&k=0&no_gap=0&offset=0&limit=50
0.802 | 0.328 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAGCCCATGCATCATTTC&k=0&no_gap=0&offset=0&limit=43
0.808 | 0.006 | cgi_end;

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