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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 08:14:38, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Apodemus sylvaticus genome assembly, chromosome: 20.
OX359317.1:15506956-15506975
GCAGTGCTGGAGGAAGGGCCTCAGCAGGGA15506956GAACAAATGGGGAGAGCAAAGGGAGACCCGGGGAGACCTGGTGATGGCCA
Cucumis melo isolate PI 511890 chromosome 3.
CP136101.1:10813670-10813689
AAGAAGGTAAGGGTTGCAACTAGGTCTTGA10813670GAACAAATGGGGAGAGCAAAAGAGCCAAAGAACTGAGCTAGGGAAAATAA
Cucumis melo genomic chromosome, chr_3.
LN713257.1:10951673-10951692
AAGAAGGTAAGGGTTGCAACTAGGTCTTGA10951673GAACAAATGGGGAGAGCAAAAGAGCCAAAGAACTGAGCTAGGGAAAATAA
Podarcis lilfordi genome assembly, chromosome: 2.
OX395127.1:8216516-8216535
ATTTTAGGGTTCTTCAGTCAAGGAAAAGGG8216516GAACAAATGGGGAGAGCAAAATAAGATATGGTTGGATTTTTAGGGTTTTT
Podarcis cretensis genome assembly, chromosome: 2.
OX638150.1:13593700-13593719
ATTTTAGGCTTCCTCAGTCAAGGAAAAGGG13593700GAACAAATGGGGAGAGCAAAATAGGATAGGGTTTTTGAGGTTGTTTTTTT
Podarcis muralis genome assembly, chromosome: 2.
OZ076955.1:13740578-13740597
ATTTTAGGCTTCCTCAGTCAAGGAAAAGGG13740578GAACAAATGGGGAGAGCAAAATAGGATAGGGTTTTTGAGGTTGGTTGGTT
Podarcis erhardii genome assembly, chromosome: 2.
OZ176201.1:14750017-14750036
ATTTTAGGCTTCCTCAGTCAAGGAAAAGGG14750017GAACAAATGGGGAGAGCAAAATAGGATAGGGTTTTTGAGGTTGGTTGGGT
Podarcis vaucheri genome assembly, chromosome: 2.
OZ220346.1:16676967-16676986
AATTTAGGGTTCTTCAGTCAAGGAAAAGGG16676967GAACAAATGGGGAGAGCAAAATAAGATAGGGTTGGTGGGGGGGTTTTTTG
Podarcis vaucheri genome assembly, chromosome: 2.
OZ220364.1:18003189-18003208
ATTTTAGGCTTCCTCAGTCAAGGAAAAGGG18003189GAACAAATGGGGAGAGCAAAATAGGATAGGGTTTTTGAGGTTGGTTGGGT
Cx20_A17.f Cucumis melo random-shear BAC library (RCM library) Cucumis melo subsp. melo genomic, genomic survey sequence.
HN321051.2:521-540
TTATTTTCCCTAGCTCAGTTCTTTGGCTCT521TTTGCTCTCCCCATTTGTTCTCAAGACCTAGTTGCAACCCTTACCTTCTT
Cucumis melo genomic scaffold, anchoredscaffold00015.
LN681817.1:5251425-5251444
TTATTTTCCCTAGCTCAGTTCTTTGGCTCT5251425TTTGCTCTCCCCATTTGTTCTCAAGACCTAGTTGCAACCCTTACCTTCTT
Haemonchus contortus strain NZ_Hco_NP chromosome 5.
CP035803.1:85404738-85404757
ATCTAATACTTCCATTTTCCTAAAAATTCG85404738TTTGCTCTCCCCATTTGTTCATGCTGCATTATACTCGTAGGTCTGAACTT
Podarcis gaigeae genome assembly, chromosome: 2.
OZ066880.1:11751764-11751783
ACAACCAACCAACCTCAAAAACCCTCCTAT11751764TTTGCTCTCCCCATTTGTTCCCCTTTTCCTTGACTGAGGAAGCCTAAAAT
Podarcis gaigeae genome assembly, chromosome: 2.
OZ066915.1:13810007-13810026
ACAACCAACCAACCTCAAAAACCCTCCTAT13810007TTTGCTCTCCCCATTTGTTCCCCTTTTCCTTGACTGAGGAAGCCTAAAAT
Podarcis siculus genome assembly, chromosome: 2.
OZ076839.1:112602057-112602076
AACAAAAAAACCTCAAAAACCCTATCTTAT112602057TTTGCTCTCCCCATTTGTTCCCCTTTTCCTTGACTGAAAAACCCTAAAAT
Malpolon monspessulanus genome assembly, chromosome: 1.
OZ184073.1:198071880-198071899
CCCCCCGCGCAATTCACTTCTCTCCTAGTG198071880TTTGCTCTCCCCATTTGTTCCTTCTCATGCCACTATCTCTCTTTGTTTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAACAAATGGGGAGAGCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAACAAATGGGGAGAGCAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.276 | 0.267 | search_plus_done; http://172.18.8.135:50800/match?q=GAACAAATGGGGAGAGCAAA&k=0&no_gap=0&offset=0&limit=50
0.454 | 0.178 | search_minus_done; http://172.18.8.135:50800/match?q=TTTGCTCTCCCCATTTGTTC&k=0&no_gap=0&offset=0&limit=41
0.459 | 0.005 | cgi_end;

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