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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:11:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Onychomys torridus genome assembly, chromosome: 4.
LR877191.1:39395591-39395610
TAACAGGCTAAAGTAAATAACTGATGGTAA39395591GAACCAGATCAAACCCCAGAGCCCCTGTTAACAGTTTGGGGTATTCTGAC
Onychomys arenicola genome assembly, chromosome: 4.
OX460350.1:40352365-40352384
TAACAGGCTAAAGTAAATAACTGATGGTAA40352365GAACCAGATCAAACCCCAGAGCCCCTGTTAACAGTTTGGGGTATTCTGAC
Onychomys leucogaster genome assembly, chromosome: 4.
OX460374.1:39708494-39708513
TAACAGGCTAAAGTAAATAACTGATGGTAA39708494GAACCAGATCAAACCCCAGAGCCCCTGTTAACAGTTTGGGGTATTCTGAC
Onychomys leucogaster genome assembly, chromosome: 4.
OX460421.1:39652497-39652516
TAACAGGCTAAAGTAAATAACTGATGGTAA39652497GAACCAGATCAAACCCCAGAGCCCCTGTTAACAGTTTGGGGTATTCTGAC
Onychomys arenicola genome assembly, chromosome: 4.
OX460445.1:39757695-39757714
TAACAGGCTAAAGTAAATAACTGATGGTAA39757695GAACCAGATCAAACCCCAGAGCCCCTGTTAACAGTTTGGGGTATTCTGAC
Onychomys torridus genome assembly, chromosome: 4.
OX460885.1:39395591-39395610
TAACAGGCTAAAGTAAATAACTGATGGTAA39395591GAACCAGATCAAACCCCAGAGCCCCTGTTAACAGTTTGGGGTATTCTGAC
Porphyra yezoensis cDNA clone:PM017e08_r, 5' end.
AV432623.1:7-26
GACCCC7GAACCAGATCAAACCCCAGATTTGGGCGCCCGTCCCCGTTGTCGCATCCC
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 6.
CP124714.1:103128228-103128247
TGATGTAATTTTCATAACACCAATCATCTA103128228GAACCAGATCAAACCCCAGAATTCCACAAAAAGTAACTTTCATGTTAAGA
Glutamicibacter mishrai strain CX1 chromosome, complete genome.
CP101461.1:3342475-3342494
TTTGGAATCCACGGGGTTTCGGTACATGAA3342475GAACCAGATCAAACCCCAGATGACGCCAACGCCACCGGTCACTACGAAGA
Arthrobacter arilaitensis RE117 chromosome, complete sequence.
FQ311875.1:3547014-3547033
CTTGGAATCCACTGGGTTTCGGTACATGAA3547014GAACCAGATCAAACCCCAGATGACGCCAACGCCACCGGTCACCACGAAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAACCAGATCAAACCCCAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAACCAGATCAAACCCCAGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.247 | 0.238 | search_plus_done; http://172.18.8.135:50400/match?q=GAACCAGATCAAACCCCAGA&k=0&no_gap=0&offset=0&limit=50
0.344 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGGGGTTTGATCTGGTTC&k=0&no_gap=0&offset=0&limit=40
0.344 | 0.000 | cgi_end;

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