GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:50:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pisum sativum microsatellite AA92 sequence; and retrotransposon Ty1/copia-like, partial sequence.
FJ434426.1:29-53
GCAGCCCACAGAAGTGCTTCAATAAATA29GAACCCTTGTGTAGAAGCATTTGTGTAGTTGTAATTTCGTTTCTTTCTCTCTCTC
Pisum sativum microsatellite AA94 sequence; and retrotransposon Ty1/copia-like, partial sequence.
FJ434427.1:27-51
AGCCCACACAGGTGGTTTTATAAATA27GAACCCTTGTGTAGAAGCATTTGTGCATTTGCAATTTCGTCTCTCTCTCTCTCTC
Pisum sativum microsatellite AA98 sequence; and retrotransposon Ty1/copia-like, partial sequence.
FJ434428.1:42-66
TTGCAGCCCACACAAGTGGTTATATAAATA42GAACCCTTGTGTAGAAGCATTTGTGCAGTTGCAATTTCGTTTCTCTCTCTCTCTC
Pisum sativum cultivar Cameor clone BACP446P4, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.
MF185734.1:34258-34282
GAGAGAGAGAGAGAAACGAAATTGCAACTT34258CACAAATGCTTCTACACAAGGGTTCTATTTATAGAACCACTTGTGTGGGTTGCAA
P.sativum DNA sequence from clone JICPSV-598E15.
CU655881.10:55597-55621
GTGAAAGAGAGAGAAATGAAATTGCAACTG55597CACAAATGCTTCTACACAAGGGTTCTATTTATAGAACCACTTGTGTGGGCTGCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAACCCTTGTGTAGAAGCATTTGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAACCCTTGTGTAGAAGCATTTGTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.175 | 0.167 | search_plus_done; http://172.18.8.135:50400/match?q=GAACCCTTGTGTAGAAGCATTTGTG&k=0&no_gap=0&offset=0&limit=50
0.263 | 0.088 | search_minus_done; http://172.18.8.135:50400/match?q=CACAAATGCTTCTACACAAGGGTTC&k=0&no_gap=0&offset=0&limit=47
0.265 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).