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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:52:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Capsicum annuum MGMT_Contig32771 mRNA sequence.
JW083015.1:163-182
GTAAGTATCTGAATTCCGAAGCGTATGGTT163GAACCTCAATCATCTTAGCAATCGATAGCGATTTCTTTTCGCCTGCGCCA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:250232604-250232623
GTAAGTATCTGAATTCCGAAGCGTATGGTT250232604GAACCTCAATCATCTTAGCAATCGATAGCGATTTCTTTTCGCCTGCGCCA
Chenopodium album genome assembly, chromosome: 2.
OX419209.1:72714809-72714828
TAAACATCCTTACAGATTCTTTTTCAGTGG72714809GAACCTCAATCATCTTAGCAGAAGTTTCCCTCCATTTATTAAAGAAAGAA
Chenopodium album genome assembly, chromosome: 9.
OX419216.1:33975653-33975672
TGAATAAGCTCACAGATTCTTTTTCACTTG33975653GAACCTCAATCATCTTAGCAGAGGTCTATCTCCATTTGTTGAAGAAAGAG
Chenopodium album genome assembly, chromosome: 9.
OX419216.1:34001511-34001530
TGAATAACCTCACAGATTCTTTTTCACTTG34001511GAACCTCAATCATCTTAGCAGAGGTCTCTCTCCATTTGTTGAAGAAAGAG
Pollenia angustigena genome assembly, chromosome: 2.
OV884057.1:116137205-116137224
GTTTATATTTAGTCTAAACATATATTTTTG116137205GAACCTCAATCATCTTAGCAAATGTTATTAAAGCCGGTTCATATTTGACC
KS10008E01 KS10 Capsicum annuum cDNA, mRNA sequence.
CA518381.1:323-342
TGGCGCAGGCGAAAAGAAATCGCTATCGAT323TGCTAAGATGATTGAGGTTCAACCATACGCTTCGGAATTCAGATACTTAC
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:4857741-4857760
TGGCGCAGGCGAAAAGAAATCGCTATCGAT4857741TGCTAAGATGATTGAGGTTCAACCATACGCTTCGGAATTCAGATACTTAC
Chenopodium album genome assembly, chromosome: 3.
OX419210.1:35223672-35223691
TTCTTTCTTTAATAAGTAGAGGGAAACCTC35223672TGCTAAGATGATTGAGGTTCCTACTAAAAAAGAGTCTGTGAGATTGTTCA
Chenopodium album genome assembly, chromosome: 4.
OX419211.1:45049649-45049668
TTCTTTCTTTAATAAGTGGAAGGAAACTTT45049649TGCTAAGATGATTGAGGTTCCCACCGAAAAAGAATCTGTGAGGATGTTTA
Chenopodium album genome assembly, chromosome: 5.
OX419212.1:52615265-52615284
TTCTTTCTTTAATAAGTGGATGGAAACCTC52615265TGCTAAGATGATTGAGGTTCCTACTGAAAAAGAATCTGTGAGATTGTTCA
Chenopodium album genome assembly, chromosome: 6.
OX419213.1:30258458-30258477
TTCTTTCTTTAATAAGTGGAGGGAAACTTC30258458TGCTAAGATGATTGAGGTTCCCACCGAAAGAGAGTCCGTAAGGATGTTTA
Chenopodium album genome assembly, chromosome: 8.
OX419215.1:31307881-31307900
TTCTTTCTTTAATAAGTGGAGGGAAACCTC31307881TGCTAAGATGATTGAGGTTCCCACCGAAAAAGAATATGTGAGGAAGTTTA
Chenopodium album genome assembly, chromosome: 8.
OX419215.1:43472200-43472219
TTCTTTCTCTAATAAGTGGAGGGAAACCTC43472200TGCTAAGATGATTGAGGTTCCTACTGAAAAAGAATTTGTGAGATTGTTCA
Furcula furcula genome assembly, chromosome: 15.
OU452257.1:5138621-5138640
GTTTAGGCTACTGATGAAGATCATTAACAT5138621TGCTAAGATGATTGAGGTTCGATTTTCCCCTTCATCTTGAGGGGAGGCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAACCTCAATCATCTTAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAACCTCAATCATCTTAGCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.181 | 0.173 | search_plus_done; http://172.18.8.135:50400/match?q=GAACCTCAATCATCTTAGCA&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.124 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTAAGATGATTGAGGTTC&k=0&no_gap=0&offset=0&limit=44
0.311 | 0.006 | cgi_end;

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