GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:49:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES05B20, 5' end sequence.
FY384026.1:242-261
GGGAAGTAGCTGAAACACATTGCAGCTCCT242TCTTTCCCGAATATGCGTTCCCTTTGGATTTTGTCTTAAGGTTGGACAGA
Dianthus caryophyllus mRNA, clone: CES12L03, 5' end sequence.
FY386900.1:205-224
GGGAAGTAGCTGAAACACATTGCAGCTCCT205TCTTTCCCGAATATGCGTTCCCTTTGGATTTTGTCTTAAGGTTGGACAGA
Dianthus caryophyllus mRNA, clone: CFES11I15, 5' end sequence.
FY398153.1:235-254
GGGAAGTAGCTGAAACACATTGCAGCTCCT235TCTTTCCCGAATATGCGTTCCCTTTGGATTTTGTCTTAAGGTTGGACAGA
Dianthus caryophyllus mRNA, clone: CFES17_M18, 5' end sequence.
FY400517.1:230-249
GGGAAGTAGCTGAAACACATTGCAGCTCCT230TCTTTCCCGAATATGCGTTCCCTTTGGATTTTGTCTTAAGGTTGGACAGA
Dianthus caryophyllus mRNA, clone: CFES23E16, 5' end sequence.
FY402545.1:251-270
GGGAAGTAGCTGAAACACATTGCAGCTCCT251TCTTTCCCGAATATGCGTTCCCTTTGGATTTTGTCTTAAGGTTGGACAGA
Dianthus caryophyllus mRNA, clone: CFES23K17, 5' end sequence.
FY402689.1:280-299
GGGAAGTAGCTGAAACACATTGCAGCTCCT280TCTTTCCCGAATATGCGTTCCCTTTGGATTTTGTCTTAAGGTTGGACAGA
Dianthus caryophyllus mRNA, clone: CFES23P18, 5' end sequence.
FY402809.1:232-251
GGGAAGTAGCTGAAACACATTGCAGCTCCT232TCTTTCCCGAATATGCGTTCCCTTTGGATTTTGTCTTAAGGTTGGACAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAACGCATATTCGGGAAAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAACGCATATTCGGGAAAGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=GAACGCATATTCGGGAAAGA&k=0&no_gap=0&offset=0&limit=50
0.687 | 0.581 | search_minus_done; http://172.18.8.135:50400/match?q=TCTTTCCCGAATATGCGTTC&k=0&no_gap=0&offset=0&limit=50
0.692 | 0.005 | cgi_end;

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