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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 20:31:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2447042-2447063
CTTTGACTCCAATACGAGATCAGATCAGAT2447042GCAATCAAGTCTCTTCGTCTTCATGATCATCTGAAAACTTCAATTTAATGCA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2546376-2546397
CTTTGACTCCAATACGAGATCAGATCAGAT2546376GCAATCAAGTCTCTTCGTCTTCATGATCATCTGAAAACTTCAATTTAATGCA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2498782-2498803
ACTCCAATACGAGATCAGATCAGATCAGAT2498782GCAATCAAGTCTCTTCGTCTTCGTGATCATCTGAAAACTTCAATTTAATGCA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2542401-2542422
ACTCCAATACGAGATCAGATCAGATCAGAT2542401GCAATCAAGTCTCTTCGTCTTCATGATCATCTGAAAACTTCAATTTAATGCA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2639686-2639707
ACTCCAATACGAGATCAGATCAGATCAGAT2639686GCAATCAAGTCTCTTCGTCTTCATGATCATCTGAAAACTTCAATTTAATGCA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2632337-2632358
ACTCCAATACGAGATCAGATCAGATCAGAT2632337GCAATCAAGTCTCTTCGTCTTCATGATCATCTGAAAACTTCAATTTAATGCA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2715361-2715382
ACTCCAATACGAGATCAGATCAGATCAGAT2715361GCAATCAAGTCTCTTCGTCTTCATGATCATCTGAAAACTTCAATTTAATGCA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2755312-2755333
ACTCCAATACGAGATCAGATCAGATCAGAT2755312GCAATCAAGTCTCTTCGTCTTCATGATCATCTGAAAACTTCAATTTAATGCA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2689198-2689219
ACTCCAATACGAGATCAGATCAGATCAGAT2689198GCAATCAAGTCTCTTCGTCTTCATGATCATCTGAAAACTTCAATTTAATGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAGACGAAGAGACTTGATTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAGACGAAGAGACTTGATTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.365 | 0.355 | search_plus_done; http://172.18.8.135:50400/match?q=GAAGACGAAGAGACTTGATTGC&k=0&no_gap=0&offset=0&limit=50
0.456 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=GCAATCAAGTCTCTTCGTCTTC&k=0&no_gap=0&offset=0&limit=50
0.462 | 0.006 | cgi_end;

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