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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 15:46:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Micromys minutus genome assembly, chromosome: 18.
OZ004798.1:39626187-39626206
CATTCTCCTTCCTTACCTAGTTGTCTGGAC39626187GAAGATGCAAGTCCTGCTCCTTCCCTTTTTTCCCTTTTAACAAAGAAAAC
Muntiacus reevesi genome assembly, chromosome: 1.
OZ005624.1:59448013-59448032
TAAGGACCACAGGAGGGATGCAAAGATAAG59448013GAAGATGCAAGTCCTGCTCCCTGGGATGGGGGCAAAATAGAAGCAGTTAT
Nigrospora oryzae linkage group LG7.
CP096787.1:360415-360434
GGCCCCTTGAAGTGATCCAGAAGCGGGCGC360415GAAGATGCAAGTCCTGCTCCCCCGGAGAGGTGGATGGAAACTCAAGATGG
Glycine max cultivar Williams 82 chromosome 2.
CP126427.1:14872156-14872175
ACGAATCATGTGATCTTCTGAGAAGTTGTA14872156GAAGATGCAAGTCCTGCTCCGTGAGGGTGTTTTGGGAACAGAGGGGCCAT
Cervus elaphus genome assembly, chromosome: 22.
OU343099.1:4224224-4224243
TAACTGCCTTCTATTTTGCCCCCATCCCAG4224224GGAGCAGGACTTGCATCTTCCTTATCTTTGTATCCCTCCTGTGGTCCTTA
Sequence 37988 from patent US 9029636.
HK947051.1:341-360
ATGGCCCCTCTGTTCCCAAAACACCCTCAC341GGAGCAGGACTTGCATCTTCTACAACTTCTCAGAAGATCACATGATTCGT
sq29b08.y1 Gm-c1046 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1046-2224 5' similar to TR:O49337 O49337 T11J7.11 PROTEIN, mRNA sequence.
BE608348.1:459-478
ATGGCCCCTCTGTTCCCAAAACACCCTCAC459GGAGCAGGACTTGCATCTTCTACAACTTCTCAGAAGATCACATGATTCGT
sas39c02.y1 Gm-c1080 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1080-6243 5' similar to TR:O49337 O49337 T11J7.11 PROTEIN, mRNA sequence.
BU763230.1:497-516
ATGGCCCCTCTGTTCCCAAAACACCCTCAC497GGAGCAGGACTTGCATCTTCTACAACTTCTCAGAAGATCACATGATTCGT
sat22b05.y1 Gm-c1036 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1036-14289 5' similar to TR:O49337 O49337 T11J7.11 PROTEIN, mRNA sequence.
CA783287.1:223-242
ATGGCCCCTCTGTTCCCAAAACACCCTCAC223GGAGCAGGACTTGCATCTTCTACAACTTCTCAGAAGATCACATGATTCGT
0526D7R Indian muntjac whole genome BAC library IM04 Muntiacus vaginalis genomic clone IM04-0526D7 3', genomic survey sequence.
HR864799.1:160-179
TAACTGCCTTCTATTTTGCCCCCATCCCAG160GGAGCAGGACTTGCATCTTCCTTATCTTTGTATCCCTCTTGTGGTCCTTA
Chlamydomonas reinhardtii strain CC-5816 chromosome 16.
CP097826.1:1713081-1713100
CTGCTGCGCAGGACACGAATCGACACCCGG1713081GGAGCAGGACTTGCATCTTCCTGGTGGCATCGTCCAGGGGTAGGCCGCCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAGATGCAAGTCCTGCTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAGATGCAAGTCCTGCTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.036 | 1.027 | search_plus_done; http://172.18.8.135:50400/match?q=GAAGATGCAAGTCCTGCTCC&k=0&no_gap=0&offset=0&limit=50
1.746 | 0.709 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGCAGGACTTGCATCTTC&k=0&no_gap=0&offset=0&limit=46
1.751 | 0.005 | cgi_end;

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