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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 02:01:37, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Apodemus sylvaticus genome assembly, chromosome: 2.
OX359298.1:101202697-101202716
AAGGAAGGTAATGAGGAAGGTAATTCAACA101202697GAAGATGGGGATGGATATGAAGAGGCAATTTATTAATGAAATTCAAGTGG
coau0002K22 Cotton Boll Abscission Zone cDNA Library Gossypium hirsutum cDNA clone coau0002K22 5', mRNA sequence.
AI054978.1:22-41
CAAGATGAAGATGTCATGGAA22GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
BNLGHi6905 Six-day Cotton fiber Gossypium hirsutum cDNA 5', mRNA sequence.
AW186902.1:115-134
GGAGAATATCAAGACGAAGATGTCTTGGAA115GAAGATGGGGATGGATATGAGGAGGAAGAANAAGAGGAANAGGAAGAGGA
GR__Eb12B18.f GR__Eb Gossypium raimondii cDNA clone GR__Eb12B18 5', mRNA sequence.
CO127501.1:119-138
GGAGAATATCAAGATGAAGATGTCATGGAA119GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAAGA
GH_ON40B16.r GH_ON Gossypium hirsutum cDNA clone GH_ON40B16 3', mRNA sequence.
DT460940.1:373-392
GGAGAATATCAAGATGAAGATGTCATGGAA373GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
GH_CHX14O15.r GH_CHX Gossypium hirsutum cDNA clone GH_CHX14O15 3', mRNA sequence.
DT464057.1:398-417
GGAGAATATCAAGACGAAGATGTCTTGGAA398GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
EST1058630 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT547990.1:358-377
GGAGAATATCAAGACGAAGATGTCTTGGAA358GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
EST1070372 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT559732.1:517-536
GGAGAATATCAAGACGAAGATGTCTTGGAA517GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
EST1077582 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT566942.1:356-375
GGAGAATATCAAGATGAAGATGTCATGGAA356GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
EST1080539 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT569899.1:270-289
GGAGAATATCAAGACGAAGATGTCTTGGAA270GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
UFL_394_63 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES825617.1:387-406
GGAGAATATCAAGATGAAGATGTCATGGAA387GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
UFL_211_94 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES829225.1:381-400
GGAGAATATCAAGACGAAGATGTCTTGGAA381GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
UFL_391_55 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES831382.1:389-408
GGAGAATATCAAGATGAAGATGTCATGGAA389GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAGGA
EST004092 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 16-H13 5', mRNA sequence.
GR710892.1:55-74
GGAGAATATCAAGACGAAGATGTCTTGGAA55GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAAGA
Gossypium herbaceum isolate Zhongcao1 chromosome 2.
CP106694.1:90597409-90597428
GGAGAATATCAAGACGAAGATATCTTGGAA90597409GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAAGA
Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:103328733-103328752
GGAGAATATCAAGACGAAGATGTCTTGGAA103328733GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAAGA
Gossypium raimondii isolate D5-3 chromosome 2.
CP156732.1:46786816-46786835
GGAGAATATCAAGATGAAGATGTCATGGAA46786816GAAGATGGGGATGGATATGAGGAGGAAGAAGAAGAGGAAGAGGAAGAAGA
Avena insularis genome assembly, chromosome: 3C.
OU342340.1:429791110-429791129
AGGCGAGCGAGGACCATGTGGTTAGAAGAT429791110GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena byzantina genome assembly, chromosome: 3C.
OU342366.1:508259125-508259144
AGGCGAGCGAGGACCATGTGGTTAGAAGAT508259125GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OU342387.1:456284023-456284042
AGGCGAGCGAGGACCATGTGGTTAGAAGAT456284023GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena atlantica genome assembly, chromosome: 3A.
OU342735.1:400048870-400048889
AGGCGAGCGAGGACCATGTGGTTAGAAGAC400048870GAAGATGGGGATGGATATGAGGCTAGGAAGGTGGTGGTAGACGTGCAGGA
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:523632156-523632175
AGGCGAGCGAGGACCATGTGGTTAGAAGAC523632156GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 10.
OV702288.1:515068752-515068771
AGGCGAGCGAGGACCATGTGGTTAGAAGAT515068752GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3A.
OX371304.1:374924265-374924284
AGGCGAGCGAGGACCATGTGGTTAGAAGAC374924265GAAGATGGGGATGGATATGAGGCTAGGAAGGTGGTGGTAGACGTGCAGGA
Avena sativa genome assembly, chromosome: 3B.
OX371305.1:379093839-379093858
AGGCGAGCGAGGACCATGTGGTTAGAAGAC379093839GAAGATGGGGATGGATATGAGGCTAGGAAGGTGGTGGTAGACGTGCAGGA
Avena barbata genome assembly, chromosome: 3A.
OX371318.1:385999006-385999025
AGGCGAGCGAGGACCATGTGGTTAGAAGAC385999006GAAGATGGGGATGGATATGAGGCTAGGAAGGTGGTGGTAGACGTGCAGGA
Avena barbata genome assembly, chromosome: 3B.
OX371319.1:374543983-374544002
AGGCGAGCGAGGACCATGTGGTTAGAAGAC374543983GAAGATGGGGATGGATATGAGGCTAGGAAGGTGGTGGTAGACGTGCAGGA
Avena magna genome assembly, chromosome: 3C.
OX371337.1:558067335-558067354
AGGCGAGCGAGGACCATGTGGTTAGAAGAT558067335GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371358.1:519572199-519572218
AGGCGAGCGAGGACCATGTGGTTAGAAGAT519572199GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371379.1:515562004-515562023
AGGCGAGCGAGGACCATGTGGTTAGAAGAT515562004GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena fatua genome assembly, chromosome: 3C.
OX371400.1:509435388-509435407
AGGCGAGCGAGGACCATGTGGTTAGAAGAT509435388GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371424.1:515777387-515777406
AGGCGAGCGAGGACCATGTGGTTAGAAGAT515777387GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371445.1:523177387-523177406
AGGCGAGCGAGGACCATGTGGTTAGAAGAT523177387GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371466.1:521155276-521155295
AGGCGAGCGAGGACCATGTGGTTAGAAGAT521155276GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371487.1:523322380-523322399
AGGCGAGCGAGGACCATGTGGTTAGAAGAT523322380GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371508.1:517152669-517152688
AGGCGAGCGAGGACCATGTGGTTAGAAGAT517152669GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371529.1:520001010-520001029
AGGCGAGCGAGGACCATGTGGTTAGAAGAT520001010GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371550.1:511714660-511714679
AGGCGAGCGAGGACCATGTGGTTAGAAGAT511714660GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371571.1:520465740-520465759
AGGCGAGCGAGGACCATGTGGTTAGAAGAT520465740GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371592.1:516396496-516396515
AGGCGAGCGAGGACCATGTGGTTAGAAGAT516396496GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371613.1:511259673-511259692
AGGCGAGCGAGGACCATGTGGTTAGAAGAT511259673GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371634.1:508533438-508533457
AGGCGAGCGAGGACCATGTGGTTAGAAGAT508533438GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371655.1:506124051-506124070
AGGCGAGCGAGGACCATGTGGTTAGAAGAT506124051GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371676.1:472100400-472100419
AGGCGAGCGAGGACCATGTGGTTAGAAGAT472100400GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371697.1:477492191-477492210
AGGCGAGCGAGGACCATGTGGTTAGAAGAT477492191GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371718.1:511837908-511837927
AGGCGAGCGAGGACCATGTGGTTAGAAGAT511837908GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371739.1:518133307-518133326
AGGCGAGCGAGGACCATGTGGTTAGAAGAT518133307GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX371760.1:520378762-520378781
AGGCGAGCGAGGACCATGTGGTTAGAAGAT520378762GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sterilis genome assembly, chromosome: 3C.
OX371847.1:522291196-522291215
AGGCGAGCGAGGACCATGTGGTTAGAAGAT522291196GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sterilis genome assembly, chromosome: 3C.
OX371868.1:517304230-517304249
AGGCGAGCGAGGACCATGTGGTTAGAAGAT517304230GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460168.1:339791637-339791656
GAATCCTTGTTTTCTAATGTAAAACCTAAT339791637GAAGATGGGGATGGATATGAATCCACTTTGGTTCAAAAATGCCCCAATGA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590750.1:303132144-303132163
GAATCCTTGTTTTCTAATGTAAAACCTAAT303132144GAAGATGGGGATGGATATGAATCCACTTTGGTTCAAAAATGCCCCAATGA
Avena sativa genome assembly, chromosome: 3C.
OX637727.1:518569169-518569188
AGGCGAGCGAGGACCATGTGGTTAGAAGAT518569169GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX637748.1:512985899-512985918
AGGCGAGCGAGGACCATGTGGTTAGAAGAT512985899GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Avena sativa genome assembly, chromosome: 3C.
OX637769.1:512867242-512867261
AGGCGAGCGAGGACCATGTGGTTAGAAGAT512867242GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737395.1:39317603-39317622
GAATCTTTGTTTTCTCATGTCAAACCTATT39317603GAAGATGGGGATGGATATGAATCCACTTTGGTTGAAAAACGCCCCAATGA
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737898.1:39317603-39317622
GAATCTTTGTTTTCTCATGTCAAACCTATT39317603GAAGATGGGGATGGATATGAATCCACTTTGGTTGAAAAACGCCCCAATGA
Avena sativa genome assembly, chromosome: 3C.
OZ077669.1:515068752-515068771
AGGCGAGCGAGGACCATGTGGTTAGAAGAT515068752GAAGATGGGGATGGATATGAGGCGAGCAAGGTGGCGGTAGGCGTGCGGGA
Vicia sativa genome assembly, chromosome: 4.
OZ078047.1:14739285-14739304
ATTGGTAGTTGTGAGATTTCAAAATGAATG14739285GAAGATGGGGATGGATATGAGGCATGGGTCTGATCGTTTATCATGGCAGA
Hordeum vulgare genome assembly, chromosome: 3.
OZ243438.1:321517888-321517907
GAATCCTTGTTTTCTAATGTAAAACCTAAT321517888GAAGATGGGGATGGATATGAATCCACTTTGGTTCAAAAATGCCCCAATGA
Hordeum vulgare genome assembly, chromosome: 3.
OZ243447.1:318113246-318113265
GAATCCTTGTTTTCTAATGTAAAACCTAAT318113246GAAGATGGGGATGGATATGAATCCACTTTGGTTCAAAAATGCCCCAATGA
Lepidonotus clava genome assembly, chromosome: 16.
OW387148.1:19969523-19969542
CAGGAAATGTATGGGGTGGAGTGATGGAGG19969523GAAGATGGGGATGGATATGAAAGGAGGGGAGATCGGAAGAAGAGGGGATA
Albinaria teres genome assembly, chromosome: 17.
OZ185660.1:31924966-31924985
AACAGACTGCTGAAGAAGAAACCCGCGAGA31924966GAAGATGGGGATGGATATGACATACAGTAACCCCCCCCCCCCCCCCCCAA
Perkinsiana rubra genome assembly, chromosome: 9.
OZ297660.1:50909058-50909077
AGAGGTGGATATGATGACGAAAGTGCTGAT50909058GAAGATGGGGATGGATATGATGATGAAAGTGCAGAAGATGAAGATGGGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAGATGGGGATGGATATGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAGATGGGGATGGATATGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.740 | 0.731 | search_plus_done; http://172.18.8.135:50900/match?q=GAAGATGGGGATGGATATGA&k=0&no_gap=0&offset=0&limit=50
0.893 | 0.153 | search_minus_done; http://172.18.8.135:50900/match?q=TCATATCCATCCCCATCTTC&k=0&no_gap=0&offset=0&limit=0
0.893 | 0.000 | cgi_end;

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