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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 19:11:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RS1AL07JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
EW719809.1:457-478
TAGCATCACCCTCAAGATCAGATCTGCTTA457GAAGATTCACACGGAGAAACCAAAGACAATTGCTGATCTAATACCAAAACCC
RS1D327JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
EY926121.1:437-458
TAGCATCACCCTCAAGATCAGATCTGCTTA437GAAGATTCACACGGAGAAACCAAAGACAATTGCTGATCTAATACCAAAACCC
RS2E920JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EY936367.1:577-598
TAGCATCACCCTCAAGATCAGATCTGCTTA577GAAGATTCACACGGAGAAACCAAAGACAATTGCTGATCTAATACCAAAACCC
RS2G739JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
FD942284.1:480-501
TAGCATCACCCTCAAGATCAGATCTGCTTA480GAAGATTCACACGGAGAAACCAAAGACAATTGCTGATCTAATACCAAAGCCC
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_13357.
FX723705.1:484-505
TAACATCACTCCCAAGATCAGATCTGCTTA484GAAGATTCACACGGAGAAACCAAAGACAATTGCTGATCTAATAATAAAACCC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB048K11, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC189374.2:90877-90898
TAACATCACTCCCAAGATCAGATCTGCTTA90877GAAGATTCACACGGAGAAACCAAAGACAATTGCTGATCTAATAATAAAACCC
Sequence 3849 from Patent EP2519097.
JB351437.1:299-320
GGGTTTTGGTATTAGATCAGCAATTGTCTT299TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGAGGGTGATGCTA
Sequence 3849 from patent US 9493785.
KH363348.1:299-320
GGGTTTTGGTATTAGATCAGCAATTGTCTT299TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGAGGGTGATGCTA
Sequence 3849 from Patent EP3056569.
LQ606998.1:299-320
GGGTTTTGGTATTAGATCAGCAATTGTCTT299TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGAGGGTGATGCTA
Sequence 3849 from patent US 10351873.
MO208570.1:299-320
GGGTTTTGGTATTAGATCAGCAATTGTCTT299TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGAGGGTGATGCTA
RS1AL07TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EW715126.1:299-320
GGGTTTTGGTATTAGATCAGCAATTGTCTT299TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGAGGGTGATGCTA
BR087825 root cDNA library KFRT Brassica rapa subsp. pekinensis cDNA clone KFRT-046E03 5', mRNA sequence.
EX101535.1:289-310
GGGTTTTATTATTAGATCAGCAATTGTCTT289TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGGGAGTGATGTTA
BR114564 root cDNA library KHRT Brassica rapa subsp. pekinensis cDNA clone KHRT-05B03 5', mRNA sequence.
EX130734.1:271-292
GGGTTTTATTATTAGATCAGCAATTGTCTT271TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGGGAGTGATGTTA
RS1D327TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EY929771.1:299-320
GGGTTTTGGTATTAGATCAGCAATTGTCTT299TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGAGGGTGATGCTA
RS2E920TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY940638.1:291-312
GGGTTTTGGTATTAGATCAGCAATTGTCTT291TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGAGGGTGATGCTA
RS2G739TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD946097.1:83-104
GGGCTTTGGTATTAGATCAGCAATTGTCTT83TGGTTTCTCCGTGTGAATCTTCTAAGCAGATCTGATCTTGAGGGTGATGCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAGATTCACACGGAGAAACCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAGATTCACACGGAGAAACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.495 | 0.486 | search_plus_done; http://172.18.8.135:50400/match?q=GAAGATTCACACGGAGAAACCA&k=0&no_gap=0&offset=0&limit=50
1.242 | 0.747 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTTTCTCCGTGTGAATCTTC&k=0&no_gap=0&offset=0&limit=44
1.248 | 0.007 | cgi_end;

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