GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-13 22:42:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Solanum melongena mRNA, clone: AE003I14, 5'end, expressed in ovary at anthesis.
FS001475.1:153-172
GAAGCCAAAAGCCGGAAAGAAGCTTCCGAC153GAAGGACGTTGGTCCTGGTATCGGGGACAAGAAGAAGAAGAAGATAAAGA
Solanum melongena mRNA, clone: CHX03K13, 5'end, expressed in ovary at 24h after anthesis.
FS013152.1:153-172
GAAGCCAAAAGCCGGAAAGAAGCTTCCGAC153GAAGGACGTTGGTCCTGGTATCGGGGACAAGAAGAAGAAGAAGATAAAGA
Lasioglossum pauxillum genome assembly, chromosome: 7.
OW121705.1:31313730-31313749
TTCACGGCGTGGAAACTTATCGCGGCGCAG31313730GAAGGACGTTGGTCCTGGTAATAATATGCATGGACTGCACACTTCTATGC
Solanum melongena mRNA, clone: AE002F03, 3'end, expressed in ovary at anthesis.
FS000774.1:448-467
TCTTTATCTTCTTCTTCTTCTTGTCCCCGA448TACCAGGACCAACGTCCTTCGTCGGAAGCTTCTTTCCGGCTTTTGGCTTC
Solanum melongena mRNA, clone: AE003I14, 3'end, expressed in ovary at anthesis.
FS001476.1:475-494
TCTTTATCTTCTTCTTCTTCTTGTCCCCGA475TACCAGGACCAACGTCCTTCGTCGGAAGCTTCTTTCCGGCTTTTGGCTTC
Solanum melongena mRNA, clone: CHX03K13, 3'end, expressed in ovary at 24h after anthesis.
FS013153.1:468-487
TCTTTATCTTCTTCTTCTTCTTGTCCCCGA468TACCAGGACCAACGTCCTTCGTCGGAAGCTTCTTTCCGGCTTTTGGCTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAAGGACGTTGGTCCTGGTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAGGACGTTGGTCCTGGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.261 | 0.252 | search_plus_done; http://172.18.8.135:50400/match?q=GAAGGACGTTGGTCCTGGTA&k=0&no_gap=0&offset=0&limit=50
0.522 | 0.261 | search_minus_done; http://172.18.8.135:50400/match?q=TACCAGGACCAACGTCCTTC&k=0&no_gap=0&offset=0&limit=47
0.524 | 0.002 | cgi_end;

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