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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 14:43:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Otolemur garnettii clone CH256-389C8, complete sequence.
AC146656.3:180854-180873
TGGAACCTCACTAGCTACAGAGACATCAAA180854GAAGGGAAAACAGAAAACAGCTTCCAGGCACGGTGGAGGGAGCCTGTAGT
Acomys russatus genome assembly, chromosome: 7.
LR877218.1:8858271-8858290
GGACTCTGACCTCTAACTCTGTCAGAGAGG8858271GAAGGGAAAACAGAAAACAGATTCACATAACAGCCTGGTTTGGGTAGGGT
Acomys kempi genome assembly, chromosome: 11.
OU015365.1:65495190-65495209
GGACTCTGACTTCTAGCTCTATCAGAGAGG65495190GAAGGGAAAACAGAAAACAGATTCACATAACAGCCTGGTTTGGGTAGAGT
Acomys dimidiatus genome assembly, chromosome: 11.
OU015384.1:55672007-55672026
GGACTCTGACCTTTAACCCTGTCAGAGAGG55672007GAAGGGAAAACAGAAAACAGATTCACATAACAGCCTGGTTTGGGTAGAGT
Acomys percivali genome assembly, chromosome: 11.
OU015752.1:73746186-73746205
GGACTCTGACCTCTAACCCTGTCAGAGAGG73746186GAAGGGAAAACAGAAAACAGATTCACATAACACCCTGGTTTGGGTAGAGT
Mus musculus molossinus genome assembly, chromosome: 11.
OW971670.1:12151410-12151429
AAATAAGTTAAGCAATCAGATTTGAGTTAA12151410GAAGGGAAAACAGAAAACAGAAAATGACAGGAAACACAGATACCAACACA
Mus musculus musculus genome assembly, chromosome: 11.
OW971773.1:11849091-11849110
AAATAAGTTAAGCAATCAGATTTGAGTTAA11849091GAAGGGAAAACAGAAAACAGAAAATGACAGGAAACACAGATACCAACACA
Apodemus sylvaticus genome assembly, chromosome: 12.
OX359309.1:6262166-6262185
TTCAAGTGAAATTGAGTACTTCATAGTGAG6262166GAAGGGAAAACAGAAAACAGAATTAGACTGTAAAAATTCAAAGCTTCTCC
Sarcophilus harrisii genome assembly, chromosome: 3.
LR735556.1:218528170-218528189
GAAAGGGGAAATGAAAGAGGGAGGCTAATA218528170GAAGGGAAAACAGAAAACAGAAGTAGTAGGGGAAAGGTGTAAGAAAGGGG
Erinaceus europaeus genome assembly, chromosome: 2.
OX485811.1:97986784-97986803
CTATATCTGAACTGGAGAAAGAAGCTGAGG97986784GAAGGGAAAACAGAAAACAGAATTATCCAGTCAAAGGATGAGCTAGAAAA
Erinaceus europaeus genome assembly, chromosome: X.
OX485817.1:110487260-110487279
AAATAGCTGTAATGAATAAAGCAGCCGAGG110487260GAAGGGAAAACAGAAAACAGAATTAGCCAGACAGAGGATGAGCTAGAGAA
Erinaceus europaeus genome assembly, chromosome: 12.
OX485822.1:86842519-86842538
TTCATAGACAGAAATTGAAAAACTAGACCG86842519GAAGGGAAAACAGAAAACAGAACTTGATCTAGAGTTGGTATATTGCACCA
Thalassophryne amazonica genome assembly, chromosome: 12.
LR722977.1:58587426-58587445
AGCCACTCAGTCCTGAACGCATGCCACCTG58587426GAAGGGAAAACAGAAAACAGAAGACAAACAAAAGCCAGCCAGGCACGCCA
Accipiter gentilis genome assembly, chromosome: 3.
OV839363.1:28733195-28733214
AAACCTGGATGCTGGCATAGCCCTGTACTG28733195GAAGGGAAAACAGAAAACAGATTGGTAAATCACAGCTAATGTGGTTTGTA
Borostomias antarcticus genome assembly, chromosome: 13.
OX465216.1:20124559-20124578
AACTGCAGCTCGACCCATAGAAACATTTGA20124559GAAGGGAAAACAGAAAACAGGCCAGTGTACCATCACTTCCTGAATCATGA
Callithrix jacchus DNA, clone: CJB1-034E14, sequence_id: CJB1-034E14.b.
LB299922.1:124-143
TTTCAGTGCCAATGTGTGTCTTACACAAAA124GAAGGGAAAACAGAAAACAGCAAAATCGGAGAGGCACACAGCCAGCCTGA
Lotus japonicus genomic DNA, chromosome 3, clone: LjB21P22, BM1669.
AP010270.1:33713-33732
AGAGAAGTCATAAGAAAAGAAAAAAAGGAA33713GAAGGGAAAACAGAAAACAGATTTGTGAGTATGAATTACATTCTTACACT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:66155273-66155292
AGAGAAGTCATAAGAAAAGAAAAAAAGGAA66155273GAAGGGAAAACAGAAAACAGATTTGTGAGTATGAATTACATTCTTACACT
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:243495455-243495474
ATTTATTTTAGCTAAACAGAACAAATGACA243495455GAAGGGAAAACAGAAAACAGAAAAGGAAAAGAAGGCTTACCTCAATTGGG
Caenorhabditis briggsae cosmid CB032J19, complete sequence.
AC084459.1:49837-49856
TTTTGCAAAAAACATTTTCGAGAGTTCTAA49837GAAGGGAAAACAGAAAACAGAAAGAATTGTAAACAGTTTCGAAACAAAAT
Coccinella septempunctata genome assembly, chromosome: X.
OU015581.1:7666614-7666633
AGTTCGTCCTACCTCTCACTCCTAAGCAAC7666614GAAGGGAAAACAGAAAACAGCTGAACTGGGACCTTGAATAGAAGAACATT
Euplexia lucipara genome assembly, chromosome: 3.
OV179145.1:9169499-9169518
CAAATGATGTTCATGCTGACACGTAGGAAT9169499GAAGGGAAAACAGAAAACAGTCTACTTAGTTAGCATAATAAGTAGATACG
Electrophaes corylata genome assembly, chromosome: Z.
OX352698.1:9719587-9719606
CAGTGTAGTGTCAATTGCACTCAATAAGGT9719587GAAGGGAAAACAGAAAACAGTTAAAATCTAGTAAATCCATAGCCACCTAA
Coleophora flavipennella genome assembly, chromosome: 3.
OX369255.1:4072377-4072396
AAAGATCGATACAAATAAAATGGCAAAACT4072377GAAGGGAAAACAGAAAACAGACGGGCATACACAAATCAATAATTAGGTAC
Hermaeophaga mercurialis genome assembly, chromosome: 2.
OX638359.1:3937377-3937396
GCTATAGAAATTAGAATTCTGAGAAAAATA3937377GAAGGGAAAACAGAAAACAGAATTAGAAATGATACAAACAGAAAAAATTT
Merodon equestris genome assembly, chromosome: 2.
OY284414.1:107201217-107201236
TCCTAAATAACCCCTTCGTCGAGGTCGATG107201217GAAGGGAAAACAGAAAACAGATTACACAAATTGCTTCCATCGCTACTGCT
Volucella zonaria genome assembly, chromosome: 4.
OZ014533.1:104574841-104574860
AACATGTTGAATAAGTGACCAAAATGGTGA104574841GAAGGGAAAACAGAAAACAGGCAATTCAAAGAGGATTACTGCTAATGAGA
Homo sapiens BAC clone RP11-489G24 from 2, complete sequence.
AC098824.3:52672-52691
GCTTCTCAGCCCTGCTCACTGTTTATTTCA52672CTGTTTTCTGTTTTCCCTTCCAAATGACTGAGCACTCTTTAAGCTCAGAA
Homo sapiens DNA, chromosome 2, nearly complete genome.
AP023462.1:42790933-42790952
GCTTCTCAGCCCTGCTCACTGTTTATTTCA42790933CTGTTTTCTGTTTTCCCTTCCAAATGACTGAGCACTCTTTAAGCTCAGAA
Homo sapiens isolate CHM13 chromosome 2.
CP068276.2:42750277-42750296
GCTTCTCAGCCCTGCTCACTGTTTATTTCA42750277CTGTTTTCTGTTTTCCCTTCCAAATGACTGAGCACTCTTTAAGCTCAGAA
Homo sapiens isolate NA24385 chromosome 2.
CP139519.1:42760041-42760060
GCTTCTCAGCCCTGCTCACTGTTTATTTCA42760041CTGTTTTCTGTTTTCCCTTCCAAATGACTGAGCACTCTTTAAGCTCAGAA
Homo sapiens isolate NA24385 chromosome 2.
CP139542.1:42776108-42776127
GCTTCTCAGCCCTGCTCACTGTTTATTTCA42776108CTGTTTTCTGTTTTCCCTTCCAAATGACTGAGCACTCTTTAAGCTCAGAA
Heterocephalus glaber genome assembly, chromosome: 22.
OX090930.1:20046330-20046349
TGTCTGGGTGGAAAGCATCAAGAAAGGTCT20046330CTGTTTTCTGTTTTCCCTTCCTTATAATCTTCTTTGGCCTCCACCTACCA
Heterocephalus glaber genome assembly, chromosome: 22.
OX090962.1:18670369-18670388
TGTCTGGGTGGAAAGCATCAAGAAAGGTCT18670369CTGTTTTCTGTTTTCCCTTCCTTATAATCTTCTTTGGCCTCCACCTACCA
Peromyscus eremicus genome assembly, chromosome: 16_21.
OX460410.1:44860159-44860178
TAATTTACCTTTTTTTTTCACTTTATAAAA44860159CTGTTTTCTGTTTTCCCTTCCTTGGAAGAGCCACTCCTCCATTCTGATCC
Peromyscus eremicus genome assembly, chromosome: 17.
OX460411.1:53975409-53975428
TCTCTGGGTTAGATTCCTTTTGCCTCTGGC53975409CTGTTTTCTGTTTTCCCTTCTCCTTCCCATTTTCCCACTCCTTTAGTCCC
Peromyscus eremicus genome assembly, chromosome: 16_21.
OX460482.1:45272167-45272186
ATAATTTACCTTTTTTTTCACTTTATAAAA45272167CTGTTTTCTGTTTTCCCTTCCTTGGAAGAGCCACTCCTCCATTCTGATCC
Peromyscus eremicus genome assembly, chromosome: 17.
OX460483.1:54885961-54885980
TCTCTGGGTTGGATTCCTTTTGCCTCTGGC54885961CTGTTTTCTGTTTTCCCTTCTCCTTCCCATTTTCCTTCTCCTTTAGTCCC
Heterocephalus glaber genome assembly, chromosome: 22.
OZ001087.1:4857700-4857719
TGTCTGGGTGGAAAGCATCAAGAAAGGTCT4857700CTGTTTTCTGTTTTCCCTTCCTTATAATCTTCTTTGGCCTCCACCTACCA
Heterocephalus glaber genome assembly, chromosome: 22.
OZ001130.1:4943621-4943640
TGTCTGGGTGGAAAGCATCAAGAAAGGTCT4943621CTGTTTTCTGTTTTCCCTTCCTTATAATCTTCTTTGGCCTCCACCTACCA
Atelerix albiventris clone LB4-341B4, complete sequence.
AC147455.3:148536-148555
TGATGCAATACACCAAATCCAGTTCAAGTT148536CTGTTTTCTGTTTTCCCTTCTGTTCTTATTTTTCAACTTCTGTCTGAGTG
Erinaceus europaeus genome assembly, chromosome: 2.
OX485811.1:115630178-115630197
CTTTGATGCAGTACAACTCAATTCCAAGTT115630178CTGTTTTCTGTTTTCCCTTCGGTTCTTATTTTTCAACTTCTTTTTTTTTT
Erinaceus europaeus genome assembly, chromosome: 3.
OX485812.1:110567317-110567336
AGTTTTCTCTAGCTCATCCTCTGGCTGCTT110567317CTGTTTTCTGTTTTCCCTTCCGTCTGCTTCCTTCTTCAATTCAGATATGT
Erinaceus europaeus genome assembly, chromosome: 6.
OX485815.1:37853383-37853402
TGGTACAATACACCAAATCCAGTCCAAGTT37853383CTGTTTTCTGTTTTCCCTTCTATTTTAATTTTTCAGCTTCTATGAGTGAG
Erinaceus europaeus genome assembly, chromosome: 8.
OX485818.1:86323473-86323492
TGATGCAATACACCAAATCCAGTTCAAGTT86323473CTGTTTTCTGTTTTCCCTTCTGTTCTTATTTTTCAACTTCTGTCTGAGTG
Martes martes genome assembly, chromosome: 7.
OY734069.1:122143797-122143816
AAAATCTGTGTCTAGATTTTCTTCTCTTTT122143797CTGTTTTCTGTTTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
Furcifer pardalis isolate Fpa_1 chromosome 7.
CP126896.1:55024997-55025016
GTCACAATAACATAAGTGACTATTCTTCCT55024997CTGTTTTCTGTTTTCCCTTCTTTTCTCCTTTTTAGTGTACTGCAAATAAA
Takifugu rubripes genome assembly, chromosome: 6.
LR584250.1:11424383-11424402
GTACCTGTGTATCGTGACAGTAAAGGCATT11424383CTGTTTTCTGTTTTCCCTTCCTGCAGCAAACTCAGAAACCATCCTCAAAT
Haliaeetus albicilla genome assembly, chromosome: 10.
OX381647.1:4034765-4034784
TTTCTGTTTACAGGTGACAACAGATGCTTT4034765CTGTTTTCTGTTTTCCCTTCTCTTGCTGTATACACATACACAGGGTATAA
Psittacula echo genome assembly, chromosome: Z.
OY725424.1:71103359-71103378
AGCTGTTTTGAATGAACTTCTTGGGTTATA71103359CTGTTTTCTGTTTTCCCTTCCTTCAAGATGTTTTAGTGGAAAGGGAAGAG
Eukaryotic synthetic construct chromosome 2.
CP034498.1:42962169-42962188
GCTTCTCAGCCCTGCTCACTGTTTATTTCA42962169CTGTTTTCTGTTTTCCCTTCCAAATGACTGAGCACTCTTTAAGCTCAGAA
Eukaryotic synthetic construct chromosome 2.
CP034523.1:42962169-42962188
GCTTCTCAGCCCTGCTCACTGTTTATTTCA42962169CTGTTTTCTGTTTTCCCTTCCAAATGACTGAGCACTCTTTAAGCTCAGAA
1095458104149 Global-Ocean-Sampling_GS-31-01-01-1P3-1P8KB marine metagenome genomic clone 1061005677852 5', genomic survey sequence.
EK177218.1:156-175
GAATTGGTAATGGTTACTGCTACGTTGTTT156CTGTTTTCTGTTTTCCCTTCAGCTTGAGGTAATTTTACATCAATGGTATT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 3.
CP124717.1:37491864-37491883
TGAATAATTACCATGCTAGGGAACCCTCAT37491864CTGTTTTCTGTTTTCCCTTCTTCCTCCATGTTTATTTTTTTCTCCTGGCT
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:10927365-10927384
TCTGCAACTTGAATGGTGTCATGGAAGCTG10927365CTGTTTTCTGTTTTCCCTTCAATAAAATAAATCATAGTACATGTTAGTCC
Arabis alpina genome assembly, chromosome: 7.
LT669794.1:41867267-41867286
TAGAGGGGAGAGTTTGTAACACTCCAATCC41867267CTGTTTTCTGTTTTCCCTTCAACCCCGCGAAGGTTTGCAAGGACAAATGC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:328132400-328132419
ACGGGATGCTCTTCGTCATCTCGCCCGCCG328132400CTGTTTTCTGTTTTCCCTTCCTCATTTACTGGCGCCCCACCATTGACGTC
Caenorhabditis briggsae isolate QX1410_ONT chromosome I.
CP090891.1:6447368-6447387
ATTTTGTTTCGAAACTGTTTACAATTCTTT6447368CTGTTTTCTGTTTTCCCTTCTTAGAACTCTCGAAAATGTTTTTTGCAAAA
Caenorhabditis briggsae isolate VX34 chromosome I.
CP092620.1:6322239-6322258
CTTTTGTTTCGAAACTGTTTACAATTCTTT6322239CTGTTTTCTGTTTTCCCTTCTTAGAACTCTCGAAAATGTTTTTTGCAAAA
Caenorhabditis briggsae strain AF16 chromosome I.
CP120830.1:6321078-6321097
ATTTTGTTTCGAAACTGTTTACAATTCTTT6321078CTGTTTTCTGTTTTCCCTTCTTAGAACTCTCGAAAATGTTTTTTGCAAAA
Anopheles darlingi genome assembly, chromosome: 2.
OX030911.1:76558203-76558222
GCTTTAAGCTCGAAGAAATAGCTTCACCAG76558203CTGTTTTCTGTTTTCCCTTCGGCCTCTCAAAACTTTTAGCTCACACCAAT
Agelas oroides genome assembly, chromosome: 7.
OX422189.1:4154118-4154137
ATATTATATCCTTGTATACCAACATGGCAA4154118CTGTTTTCTGTTTTCCCTTCATACTCTCAAAGGTGATGATGCCAAGCTCT
Luidia sarsii genome assembly, chromosome: 21.
OX465121.1:8508912-8508931
TCGCAGAAACTAGAAATCCCTCCTGTCTGC8508912CTGTTTTCTGTTTTCCCTTCCACATTTCATGAAAATTCTTTCATGAGGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAGGGAAAACAGAAAACAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAGGGAAAACAGAAAACAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.474 | 0.465 | search_plus_done; http://172.18.8.135:50400/match?q=GAAGGGAAAACAGAAAACAG&k=0&no_gap=0&offset=0&limit=50
0.648 | 0.174 | search_minus_done; http://172.18.8.135:50400/match?q=CTGTTTTCTGTTTTCCCTTC&k=0&no_gap=0&offset=0&limit=23
0.671 | 0.024 | cgi_end;

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