GGGenome | Results

2025-04-09 07:29:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Elaeis guineensis EST, clone (6lib)_isotig25765.
LM617601.1:132-155

TTCCAGATCCCAGCAAGTGCAGTGATCAGA132GAAGTACACAAGGTAAGTTCATAGTTTAAAGTCACAAGCATGCATATATATATA

pOP-EON00555_EST_C_1_pSK_SK EON (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EON00555 similar to catalase, mRNA sequence.
DW248258.1:589-612

TATATATATATGCATGCTTGTGACTTTAAA589CTATGAACTTACCTTGTGTACTTCTCTGATCACTGCACTTG

OPYF03003 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone MF351.seq, mRNA sequence.
EL683644.1:150-173

TATATATATATGCATGCTGGTGACTTTAAA150CTATGAACTTACCTTGTGTACTTCTCTGATCACTGCACTTGCTGGGATCTGNAA

OPR02512 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_292.seq, mRNA sequence.
EL692472.1:308-331

TATATATATATGCATGCTTGTGACTTTAAA308CTATGAACTTACCTTGTGTACTTCTCTG

pOP-CNIP00421 CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00421, mRNA sequence.
ES324079.1:265-288

TATATATATATGCATGCTTGTGACTTTAAA265CTATGAACTTACCTTGTGTACTTCTCTGATCACTGCACTTGCTGGGATCTGGAA

pOP-CNH04952_EST_C_1_pSK_SK CNH (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNH04952 5', mRNA sequence.
EY400471.1:362-385

TATATATATATGCATGCTTGTGACTTTAAA362CTATGAACTTACCTTGTGTACTTCTCTGATCACTGCACTTGCTGGGATCTGGAA

pOP-CNIP00421_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00421 5', mRNA sequence.
EY403542.1:265-288

TATATATATATGCATGCTTGTGACTTTAAA265CTATGAACTTACCTTGTGTACTTCTCTGATCACTGCACTTGCTGGGATCTGGAA

pOP-CNIP00477_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00477 5', mRNA sequence.
EY404017.1:217-240

TATATATATATGCATGCTTGTGACTTTAAA217CTATGAACTTACCTTGTGTACTTCTCTGATCACTGCACTTGCTGGGATCTGGAA

Elaeis guineensis clone EGEMS0144 microsatellite sequence.
KJ830494.1:265-288

TATATATATATGCATGCTTGTGACTTTAAA265CTATGAACTTACCTTGTGTACTTCTCTGATCACTGCACTTGCTGGGATCTGGAA

Elaeis guineensis clone EGEMS0190 microsatellite sequence.
KJ830503.1:265-288

TATATATATATGCATGCTTGTGACTTTAAA265CTATGAACTTACCTTGTGTACTTCTCTGATCACTGCACTTGCTGGGATCTGGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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Debug Info:

0.009 | 0.009 | search_start;
0.220 | 0.211 | search_plus_done; http://172.18.8.135:50400/match?q=GAAGTACACAAGGTAAGTTCATAG&k=0&no_gap=0&offset=0&limit=50
0.697 | 0.476 | search_minus_done; http://172.18.8.135:50400/match?q=CTATGAACTTACCTTGTGTACTTC&k=0&no_gap=0&offset=0&limit=49
0.702 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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