GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:25:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Arachis hypogaea Ahy.Unigene35840 mRNA sequence.
JR573198.1:1308-1327
TGTATGTCATAAAGAAGGTGGCCTTCATTG1308GAATCGAAACTCCGATGGTTCTAGGAATCTGTGTAGCTGACTGGTGAAGG
TSA: Arachis hypogaea Ahy.Unigene51052 mRNA sequence.
JR585172.1:985-1004
TGTATGTCATAAAGAAGGTGGCCTTCATTG985GAATCGAAACTCCGATGGTTCTAGGAATCTGTGTAGCTGACTGGTGAAGG
Arachis hypogaea DNA, clone: 8iHA03O09, cultivar: YI-0311.
DE998521.1:10-29
CCTTCATTG10GAATCGAAACTCCGATGGTTCTAGGAATCCTGTTACCAATAAGTAGAAAA
TSA: Arachis hypogaea CL17138Contig1.Arhy mRNA sequence.
EZ750919.1:111-130
CCTTCACCAGTCAGCTACACAGATTCCTAG111AACCATCGGAGTTTCGATTCCAATGAAGGCCACCTTCTTTATGACATACA
TSA: Arachis hypogaea Ahy.Unigene59077 mRNA sequence.
JR590649.1:1135-1154
CCTTCACCAGTCAGCTACACAGATTCCTAG1135AACCATCGGAGTTTCGATTCCAATGAAGGCCACCTTCTTTATGACATACA
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:194112-194131
TTTTCTACTTATTGGTAACAGGATTCCTAG194112AACCATCGGAGTTTCGATTCCAATGAAGGCCACCTTCTTTATGACATACA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:1895919-1895938
TTTTCTACTTATTGGTAACAGGATTCCTAG1895919AACCATCGGAGTTTCGATTCCAATGAAGGCCACCTTCTTTATGACATACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAATCGAAACTCCGATGGTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATCGAAACTCCGATGGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.334 | 0.325 | search_plus_done; http://172.18.8.135:50400/match?q=GAATCGAAACTCCGATGGTT&k=0&no_gap=0&offset=0&limit=50
0.423 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=AACCATCGGAGTTTCGATTC&k=0&no_gap=0&offset=0&limit=47
0.426 | 0.003 | cgi_end;

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