GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 15:11:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cenchrus purpureus cultivar elephant grass chromosome A6.
CP053459.1:41954174-41954193
ACTCCCATATCTCTGGCAAGTCAGGCTTCG41954174GAATCTCCGAGGCACAAGAAGACTGGCTCTGGGCAGCCCGACGTGCCTGG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:121717648-121717667
ACTGCATTTATTCAATTGGTGCATGCTCCT121717648GAATCTCCGAGGCACAAGAAGGATTTTCTACTGCTTTTAAATTAGTTGGG
KS24012E09 KS24 Capsicum annuum cDNA, mRNA sequence.
GD119015.1:119-138
CCCAACTAATTTAAAAGCAGTAGAAAATCC119TTCTTGTGCCTCGGAGATTCAGGAGCATGCACCAATTGAATAAATGCAGT
TSA: Capsicum annuum MGMT_Contig15542, mRNA sequence.
JW065786.1:87-106
CCCAACTAATTTAAAAGCAGTAGAAAATCC87TTCTTGTGCCTCGGAGATTCAGGAGCATGCACCAATTGAATAAATGCAGT
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:168588577-168588596
CCCAACTAATTTAAAAGCAGTAGAAAATCC168588577TTCTTGTGCCTCGGAGATTCAGGAGCATGCACCAATTGAATAAATGCAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAATCTCCGAGGCACAAGAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATCTCCGAGGCACAAGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=GAATCTCCGAGGCACAAGAA&k=0&no_gap=0&offset=0&limit=50
0.229 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=TTCTTGTGCCTCGGAGATTC&k=0&no_gap=0&offset=0&limit=48
0.232 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).