GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 17:37:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea DNA, clone: AHGS40D23.
DH961622.1:32-51
CACAGTTGAGAGTTAGTTACAATTAAGTTA32GAATCTGCTGTGGACCGTCTCAAGTTAGTTAGAGTAAGCTAGCCTCTAGA
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:133789632-133789651
CACAGTTGAGAGTTAGTTACAATTAAGTTA133789632GAATCTGCTGTGGACCGTCTCAAGTTAGTTAGAGTAAGCTAGCCTCTAGA
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:125915151-125915170
TCTAGAGGCTAGCTTACTCTAACTAACTTG125915151AGACGGTCCACAGCAGATTCCAACTTAATTGTAACTAACTCTCAACTGTG
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:138706079-138706098
TCTAGAGGCTAGCTTACTCTAACTAACTTG138706079AGACGGTCCACAGCAGATTCCAACTTAATTGTAACTAACTCTCAACTGTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAATCTGCTGTGGACCGTCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATCTGCTGTGGACCGTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.128 | 0.120 | search_plus_done; http://172.18.8.135:50400/match?q=GAATCTGCTGTGGACCGTCT&k=0&no_gap=0&offset=0&limit=50
0.156 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=AGACGGTCCACAGCAGATTC&k=0&no_gap=0&offset=0&limit=48
0.157 | 0.001 | cgi_end;

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