GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 10:35:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:4279264-4279285
GTCGAGTCCTATCAGCTGCGAATTGATCGA4279264GAATGACTCAAGCGTAGACCTGCGTAACTTTCTTGGTTGGTTATAAACTTAT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:4245669-4245690
GTCGAGTCCTATCAGCTGCGAATTGATCGA4245669GAATGACTCAAGCGTAGACCTGCGTAACTTTCTTGGTTGGTTATAAACTTAT
Chionographis japonica genome assembly, chromosome: 2.
OX393550.1:28990283-28990304
GTTCCTCCTTGATAGCTGCCGGCAGTACAT28990283CAGGTCTACGCTTGAGTCATTCTAGGATGAGGGTTTTGGCGCTCTCCAAGAT
Chionographis japonica genome assembly, chromosome: 2.
OX393550.1:62709054-62709075
GTTCCTCCTTGATAGTTGTCGGCAGTACAT62709054CAGGTCTACGCTTGAGTCATTCCAGGACGATGGTTTTGACGCTCTCCAAGAT
Chionographis japonica genome assembly, chromosome: 8.
OX393556.1:6246522-6246543
GTTCCTTCTTGATAGCTGCCGGCAACACAT6246522CAGGTCTACGCTTGAGTCATTCTAGGATGAGGGTTTTGGCGCTCTCCAATAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAATGACTCAAGCGTAGACCTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATGACTCAAGCGTAGACCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.090 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=GAATGACTCAAGCGTAGACCTG&k=0&no_gap=0&offset=0&limit=50
0.104 | 0.013 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGTCTACGCTTGAGTCATTC&k=0&no_gap=0&offset=0&limit=48
0.106 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).