GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 06:31:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 5, clone: LjT15O18, TM0086.
AP006634.1:27484-27505
ACATTTGTGGTGGGATGCTTTTCAAGATTA27484GAATGAGAAATCTCATGTTTGCTTCAAATTAATTGTGTACAAGGATAGAAAG
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:48570206-48570227
ACATTTGTGGTGGGATGCTTTTCAAGATTA48570206GAATGAGAAATCTCATGTTTGCTTCAAATTAATTGTGTACAAGGATAGAAAG
Lotus japonicus mRNA, clone: MPD018b12_r, 5' end sequence.
DC596402.1:287-308
CTTTCTATCCTTGTACACAATTAATTTGAA287GCAAACATGAGATTTCTCATTCTAATCTTGAAAAGCATCCCACCACAAATGT
Lotus japonicus cDNA, clone: LjFL3-054-DC11.r0, 3'-end sequence.
FS362403.1:295-316
CTTTCTATCCTTGTACACAATTAATTTGAA295GCAAACATGAGATTTCTCATTCTAATCTTGAAAAGCATCCCACCACAAATGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAATGAGAAATCTCATGTTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATGAGAAATCTCATGTTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GAATGAGAAATCTCATGTTTGC&k=0&no_gap=0&offset=0&limit=50
0.210 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAACATGAGATTTCTCATTC&k=0&no_gap=0&offset=0&limit=48
0.212 | 0.002 | cgi_end;

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