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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:39:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Artemisia annua strain Artemis Contig6231.Aylt mRNA sequence.
EZ209220.1:243-262
AGTGACGCTTCGCCAAATAAGATATACTGT243GAATGCAACATATGCAACCGTAAAAATGGTTACAATAGATGTAAAGGCTA
TSA: Lactuca sativa CLC_LTR_V1A_38165 mRNA sequence.
JI579859.1:328-347
AACAACACTTCTCCAAATAAGATATACAAT328GAATGCAACATATGCAACCGTGAAAATGACGACTGTTGAAGTAAACGCGG
TSA: Lactuca sativa Letassy_A1_1913 mRNA sequence.
JI582798.1:328-347
AACAACACTTCTCCAAATAAGATATACAAT328GAATGCAACATATGCAACCGTGAAAATGACGACTGTTGAAGTAAACGCGG
TSA: Lactuca serriola Serrassy_T_P2_12264 mRNA sequence.
JO027230.1:318-337
AACAACACTTCTCCAAATAAGATATACAAT318GAATGCAACATATGCAACCGTGAAAATGACGACTGTAGAAGTAAACGCGG
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:251756737-251756756
AACAACACTTCGCCATATAAGGTACACTAT251756737GAATGCAACATATGCAACCGTGAAAATGACGACTGTAGAAGTAAACGCGG
Lithophane socia genome assembly, chromosome: 12.
OX383263.1:7134337-7134356
TTCTCTTATGAATTCTAAATTCGTGCAGTA7134337GAATGCAACATATGCAACCGGGTCTGTATCTTTATTTGCATCAATCGACC
QGA19A11.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGA19A11, mRNA sequence.
BQ846295.1:404-423
CCGCGTTTACTTCAACAGTCGTCATTTTCA404CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGA19J18.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGA19J18, mRNA sequence.
BQ846486.1:371-390
CCGCGTTTACTTCAACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGB18C05.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGB18C05, mRNA sequence.
BQ852478.1:371-390
CCGCGTTTACTTCAACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGC24H10.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC24H10, mRNA sequence.
BQ863651.1:404-423
CCGCGTTTACTTCAACAGTCGTCATTTTCA404CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGC25M24.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC25M24, mRNA sequence.
BQ864111.1:402-421
CCGCGTTTACTTCAACAGTCGTCATTTTCA402CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGI6O02.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI6O02, mRNA sequence.
BQ875003.1:371-390
CCGCGTTTACTTCAACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGE11J18.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGE11J18, mRNA sequence.
BQ980636.1:375-394
CCGCGTTTACTTCTACAGTCGTCATTTTCA375CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGE13B08.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGE13B08, mRNA sequence.
BQ981182.1:372-391
CCGCGTTTACTTCTACAGTCGTCATTTTCA372CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGCGTTGTT
QGF14F18.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGF14F18, mRNA sequence.
BQ988228.1:371-390
CCGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGF21E18.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGF21E18, mRNA sequence.
BQ990857.1:371-390
CCGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGF26F18.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGF26F18, mRNA sequence.
BQ992696.1:371-390
CCGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGG13N10.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG13N10, mRNA sequence.
BQ996803.1:371-390
CCGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGG17E06.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG17E06, mRNA sequence.
BQ997734.1:371-390
CTGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGJ12B23.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ12B23, mRNA sequence.
BU009971.1:371-390
CCGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGJ13D15.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ13D15, mRNA sequence.
BU010365.1:371-390
CCGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGJ5L01.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ5L01, mRNA sequence.
BU013819.1:371-390
CCGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGJ7E14.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ7E14, mRNA sequence.
BU014414.1:371-390
CCGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
QGJ7G07.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ7G07, mRNA sequence.
BU014455.1:371-390
CCGCGTTTACTTCTACAGTCGTCATTTTCA371CGGTTGCATATGTTGCATTCATTGTATATCTTATTTGGAGAAGTGTTGTT
Cynara cardunculus var. altilis Nramp3-like protein mRNA, partial cds.
MN889990.1:1055-1074
CCACCTTTACGTCCATAGTAGTTGCCTTCA1055CGGTTGCATATGTTGCATTCATCGTGTATTTTATCTGGCGGAGCATTACT
Chrysanthemum makinoi genome assembly, chromosome: 4.
OU343220.1:203143448-203143467
TAGCCTTTACATCTATAGTAACCATTTTTA203143448CGGTTGCATATGTTGCATTCACAGTATATCTTATTTGGCGAGCGTCACCT
Chrysanthemum makinoi genome assembly, chromosome: 4.
OU343220.1:203182793-203182812
TAGCCTTTACATCTATAGTAACCATTTTTA203182793CGGTTGCATATGTTGCATTCACAGTATATCTTATTTGGCGAAGCGTCACC
Arctium minus genome assembly, chromosome: 13.
OX941092.1:14856591-14856610
CCAGCTTTACTTCTGTGGTAATTGTCTTCA14856591CGGTTGCATATGTTGCATTCATCGTATATCTTATCTGGCGAAGCATAACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAATGCAACATATGCAACCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATGCAACATATGCAACCG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.254 | 0.245 | search_plus_done; http://172.18.8.135:50400/match?q=GAATGCAACATATGCAACCG&k=0&no_gap=0&offset=0&limit=50
0.817 | 0.563 | search_minus_done; http://172.18.8.135:50400/match?q=CGGTTGCATATGTTGCATTC&k=0&no_gap=0&offset=0&limit=44
0.831 | 0.014 | cgi_end;

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