GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-17 07:07:52, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Heterocephalus glaber genome assembly, chromosome: 10.
OZ001075.1:42791671-42791694
TCACTCAAGAAGTTTCCAAGGGAAGCTTGA42791671GAATTCAACCAAAAACCATAATCATTTTATCCTTGACTTTGTTCTACCATCAAC
Heterocephalus glaber genome assembly, chromosome: 10.
OZ001118.1:43278056-43278079
TCACTCAAGAAGTTTCCAAGGGAAGCTTGA43278056GAATTCAACCAAAAACCATAATCATTTTATCCTTGACTTTGTTCTACCATCAAC
Heterocephalus glaber genome assembly, chromosome: 15.
OZ179183.1:34223123-34223146
TCACTCAAGAAGTTTCCAAGGGAAGCTTGA34223123GAATTCAACCAAAAACCATAATCATTTTATCCTTGACTTTGTTCTACCATCAAC
Heterocephalus glaber genome assembly, chromosome: 15.
OZ179214.1:34656121-34656144
TCACTCAAGAAGTTTCCAAGGGAAGCTTGA34656121GAATTCAACCAAAAACCATAATCATTTTATCCTTGACTTTGTTCTACCATCAAC
Cucumis melo genomic scaffold, anchoredscaffold00030.
LN681813.1:3075176-3075199
TATTGTGAGCAATCCCAAGAACATGGAGAA3075176GAATTCAACCAAAAACCATAATCAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGA
Heterocephalus glaber genome assembly, chromosome: 16.
OX090924.1:50954268-50954291
GTTGATGGTAGAACAAAGTCAAGGATAAAA50954268TGATTATGGTTTTTGGTTGAATTCTCAAGCTTCCCTTGGAAACTTCTTGAGTGA
Heterocephalus glaber genome assembly, chromosome: 16.
OX090956.1:34654533-34654556
GTTGATGGTAGAACAAAGTCAAGGATAAAA34654533TGATTATGGTTTTTGGTTGAATTCTCAAGCTTCCCTTGGAAACTTCTTGAGTGA
Cucumis melo isolate PI 511890 chromosome 2.
CP136103.1:21135896-21135919
TTTCTGAATCTCTCTCTCTCTCTCTCTTTC21135896TGATTATGGTTTTTGGTTGAATTCTTCTCCATGTTCTTGGGATTGCTCACAATA
Cucumis melo genomic chromosome, chr_2.
LN713256.1:22195859-22195882
TCTCTCTCTCTCTCTCTCTCTCTCTCTTTC22195859TGATTATGGTTTTTGGTTGAATTCTTCTCCATGTTCTTGGGATTGCTCACAATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAATTCAACCAAAAACCATAATCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATTCAACCAAAAACCATAATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.198 | 0.189 | search_plus_done; http://172.18.8.135:50800/match?q=GAATTCAACCAAAAACCATAATCA&k=0&no_gap=0&offset=0&limit=50
0.270 | 0.072 | search_minus_done; http://172.18.8.135:50800/match?q=TGATTATGGTTTTTGGTTGAATTC&k=0&no_gap=0&offset=0&limit=45
0.272 | 0.003 | cgi_end;

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