GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Malus x robusta genome assembly, chromosome: 12.
OY720336.1:13267610-13267629

TCAAACTTGGCACGAAAAGTGTGATTCCGA13267610GAATTTTCCTTTTCGCAGGTACCACCGGAAGGATCTCTTGAGAACTGTAA

Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:13227845-13227864

GCAAACTTGGCACGAAAAGTGTGATTCCGA13227845GAATTTTCCTTTTCGCAGGTACCCCCAAGGATCTCTTGAGAACTGTAAAA

Pyrus communis genome assembly, chromosome: 16.
OY757083.1:10115976-10115995

TCAAACTTGGCACGAAAAGTGTGATTCCGA10115976GAATTTTCCTTTTCGCAGGTACTACCCCGAAGGATCTCTTGAAAACTGTA

Maribacter sp. 1_2014MBL_MicDiv chromosome, complete genome.
CP011318.1:3776019-3776038

TCTACAATAATGCTATGTTTTTTTCTTTCT3776019GAATTTTCCTTTTCGCAGGTTAATGCAACAACGGATAATGGGAAAGTTGT

Caenorhabditis uteleia genome assembly, chromosome: X.
OY752138.1:15343491-15343510

GATACACCCAATCATTACCCCTTTTTTTCC15343491GAATTTTCCTTTTCGCAGGTCGTCTCGCCCATCTTTTCATTGTTTAGAAT

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:20263570-20263589

TTACAGTTCTCAAGAGATCCTTCGGGTGGT20263570ACCTGCGAAAAGGAAAATTCTCGGATCACACTTTTCGTGCCAAGTTTGAC

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:31358236-31358255

TTACAGTTCTCAAGAGATCCTTCGGGTGGT31358236ACCTGCGAAAAGGAAAATTCTCGGATCACACTTTTCGTGCCAAGTTTGAC

Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:20633552-20633571

TTACAGTTCTCAAGAGATCCTTCGGGTGGT20633552ACCTGCGAAAAGGAAAATTCTCGGATCACACTTTTCGTGCCAAGTTTGAC

Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:19087845-19087864

TTACAGTTCTCAAGAGATCCTTCGGGTGGT19087845ACCTGCGAAAAGGAAAATTCTCGGATCACACTTTTCGTGCCAAGTTTGAC

Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:20517557-20517576

TTACAGTTCTCAAGAGATCCTTCGGGTGGT20517557ACCTGCGAAAAGGAAAATTCTCGGATCACACTTTTCGTGCCAAGTTTGAC

Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:20120797-20120816

TTACAGTTCTCAAGAGATCCTTCCGGTGGT20120797ACCTGCGAAAAGGAAAATTCTCGGAATCACACTTTTCGTGCCAAGTTTGA

Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:16700002-16700021

TTACGGTTCTCAAGAGATCCTTCGGGTGGT16700002ACCTGCGAAAAGGAAAATTCTCGGATCACACTTTTCGTGCCAAGTTTGAC

Malus domestica genome assembly, chromosome: 1.
OU696677.1:16859212-16859231

TTACAGTTCTCAAGAGATCCTTCCGGTGGT16859212ACCTGCGAAAAGGAAAATTCTCGGAATCACACTTTTCGTGCCAAGTTTGA

Malus domestica genome assembly, chromosome: 1.
OU744542.1:20566712-20566731

TTACAGTTCTCAAGAGATCCTTCGGGTGGT20566712ACCTGCGAAAAGGAAAATTCTCGGATCACACTTTTCGTGCCAAGTTTGAC

Malus domestica genome assembly, chromosome: 1.
OU744953.1:20135853-20135872

TTACGGTTCTCAAGAGATCCTTCGGGTGGT20135853ACCTGCGAAAAGGAAAATTCTCGGATCACACTTTTCGTGCCAAGTTTGAC

Malus domestica genome assembly, chromosome: 1.
OU744991.1:16812374-16812393

TTACAGTTCTCAAGAGATCCTTCGGGTGGT16812374ACCTGCGAAAAGGAAAATTCTCGGATCACACTTTTCGTGCCAAGTTTGAC

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Debug Info:

0.008 | 0.008 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=GAATTTTCCTTTTCGCAGGT&k=0&no_gap=0&offset=0&limit=50
0.137 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=ACCTGCGAAAAGGAAAATTC&k=0&no_gap=0&offset=0&limit=45
0.144 | 0.007 | cgi_end;

Summary:

Results:

Data Export:

Debug Info: