GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 06:07:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Cannabis sativa PK17728.1_1.CasaPuKu mRNA sequence.
JP449592.1:1977-1996
CAGAATGACTGATGAAGATAAAATTAACTT1977GACAACCTTGTATCGCCTTTTGCTACTGATGGCGAGCGTTCAAGAAACAG
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:966126763-966126782
AAATCTCTAAAGCTACTAGTTTCCAATCAA966126763GACAACCTTGTATCGCCTTTGAACGCCTATGAAAGGAGGAGCTCGCCCCC
Coccinella septempunctata genome assembly, chromosome: 7.
OU015579.1:15360466-15360485
AATCAGCAACTAGAACGGGCTTGAAAAACA15360466AAAGGCGATACAAGGTTGTCTATGGATACGAAAATCAAAACATTCAAAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GACAACCTTGTATCGCCTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GACAACCTTGTATCGCCTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.117 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=GACAACCTTGTATCGCCTTT&k=0&no_gap=0&offset=0&limit=50
0.159 | 0.041 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGGCGATACAAGGTTGTC&k=0&no_gap=0&offset=0&limit=48
0.159 | 0.001 | cgi_end;

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