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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 20:59:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RS3DH70TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EY947691.1:147-166
TACAGAAGACTAGCGATGAAATGGCATCCG147GACAAGAACCCTTCGACCAAGAAAGAAGCTGAAGCTAAATTCAAACAGAT
RR1EY56TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
FD533667.1:97-116
TACAGAAGACTAGCGATGAAATGGCATCCG97GACAAGAACCCTTCGACCAAGAAAGAAGCTGAAGCTAAATTCAAACAGAT
Raphanus sativus mRNA, clone: RSCL05L05, 5' end sequence.
FY434761.1:206-225
TACAGAAGACTAGCGATGAAATGGCATCCC206GACAAGAACCCTTCGACCAAGAAAGAAGCTGAAGCTAAATTCAAACAGAT
Raphanus sativus mRNA, clone: RSCS04O05, 5' end sequence.
FY447522.1:219-238
TACAGAAGACTAGCGATGAAATGGCATCCC219GACAAGAACCCTTCGACCAAGAAAGAAGCTGAAGCTAAATTCAAACAGAT
Raphanus sativus mRNA, clone: RSCS05L17, 5' end sequence.
FY447817.1:215-234
TACAGAAGACTAGCGATGAAATGGCATCCC215GACAAGAACCCTTCGACCAAGAAAGAAGCTGAAGCTAAATTCAAACAGAT
Raphanus sativus mRNA, clone: RSCS13H12, 5' end sequence.
FY450531.1:232-251
TACAGAAGACTAGCGATGAAATGGCATCCC232GACAAGAACCCTTCGACCAAGAAAGAAGCTGAAGCTAAATTCAAACAGAT
Raphanus sativus mRNA, clone: RSCS24L05, 5' end sequence.
FY454558.1:206-225
TACAGAAGACTAGCGATGAAATGGCATACC206GACAAGAACCCTTCGACCAAGAAAGAAGCTGAAGCTAAATTCAAACAGAT
TSA: Raphanus sativus RS06903 mRNA sequence.
JT791450.1:213-232
TACAGAAGACTAGCGATGAAATGGCATCCC213GACAAGAACCCTTCGACCAAGAAAGAAGCTGAAGCTAAATTCAAACAGAT
TSA: Raphanus sativus RS06904 mRNA sequence.
JT791451.1:213-232
TACAGAAGACTAGCGATGAAATGGCATCCC213GACAAGAACCCTTCGACCAAGAAAGAAGCTGAAGCTAAATTCAAACAGAT
TSA: Raphanus sativus var. sativus RNA, contig: WG3_1379.
FX660466.1:1073-1092
ATCTGTTTGAATTTAGCTTCAGCTTCTTTC1073TTGGTCGAAGGGTTCTTGTCGGGATGCCATTTCATCGCTAGTCTTCTGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GACAAGAACCCTTCGACCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GACAAGAACCCTTCGACCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.871 | 0.863 | search_plus_done; http://172.18.8.135:50400/match?q=GACAAGAACCCTTCGACCAA&k=0&no_gap=0&offset=0&limit=50
0.976 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGTCGAAGGGTTCTTGTC&k=0&no_gap=0&offset=0&limit=41
0.977 | 0.001 | cgi_end;

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