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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 13:47:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RBAA349TH RBAA-Castor bean cDNA library from leaves,680bp Ricinus communis cDNA clone RBAA349, mRNA sequence.
EE254282.1:394-415
GCATCTGCAGCTGATATTTTCCAGTACTAG394GACAGACCCATCTCAAGATTCCCGGTCTTCAATGGAATGGTGAGGAGAAAAT
RFAAA63TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAA63, mRNA sequence.
EE256105.1:293-314
GCATCTGCAGCTGATATTTTCCAGTACTAG293GACAGACCCATCTCAAGATTCCCGGTCTTCAATGGAATGGTGAGGAGAAAAT
RFAB067TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAB067, mRNA sequence.
EE258349.1:388-409
GCATCTGCAGCTGATATTTTCCAGTACTAG388GACAGACCCATCTCAAGATTCCCGGTCTTCAATGGAATGGTGAGGAGAAAAT
RFABU85TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABU85, mRNA sequence.
EE258998.1:395-416
GCATCTGCAGCTGATATTTTCCAGTACTAG395GACAGACCCATCTCAAGATTCCCGGTCTTCAATGGAATGGTGAGGAGAAAAT
RFABL28TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABL28, mRNA sequence.
EE259516.1:388-409
GCATCTGCAGCTGATATTTTCCAGTACTAG388GACAGACCCATCTCAAGATTCCCGGTCTTCAATGGAATGGTGAGGAGAAAAT
Siphonodentalium dalli isolate Sc116.8C chromosome VII.
CP136067.1:38110723-38110744
TGTCCGGAATAGAAAACAAGATCAAATTTC38110723GACAGACCCATCTCAAGATTCCAAGCGAACCAAAAAAATTATTATTATGGGA
Siphonodentalium dalli isolate Sc116.8C chromosome VII.
CP136067.1:41715931-41715952
TGTCCGGAATAGAAAACAAAATCAAATTTC41715931GACAGACCCATCTCAAGATTCCAAGCGAACCAAAAAAATTATTATTATGGGA
RFAAW56TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAW56, mRNA sequence.
EE255510.1:341-362
ATTTTCTCCTCACCATTCCATTGAAGACCG341GGAATCTTGAGATGGGTCTGTCCTAGTACTGGAAAATATCAGCTGCAGATGC
RFAAF60TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAAF60, mRNA sequence.
EE257385.1:298-319
ATTTTCCCCTCACCATTCCATTGAAAACCG298GGAATCTTGAGATGGGTCTGTCCTAATACTGGAAAATATCAGCTGCAGATGC
RFABK56TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABK56, mRNA sequence.
EE259292.1:310-331
ATTTTCTCCTCACCATTCCATTGAAGACCG310GGAATCTTGAGATGGGTCTGTCCTAGTACTGGAAAATATCAGCTGCAGATGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GACAGACCCATCTCAAGATTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GACAGACCCATCTCAAGATTCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.450 | 0.441 | search_plus_done; http://172.18.8.135:50400/match?q=GACAGACCCATCTCAAGATTCC&k=0&no_gap=0&offset=0&limit=50
0.910 | 0.460 | search_minus_done; http://172.18.8.135:50400/match?q=GGAATCTTGAGATGGGTCTGTC&k=0&no_gap=0&offset=0&limit=43
0.912 | 0.002 | cgi_end;

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