GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:50:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JP 2010512141-A/932: TRANSCRIPTION FACTORS.
FW352550.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
JP 2010512141-A/1121: TRANSCRIPTION FACTORS.
FW352739.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
Sequence 1787 from patent US 7507875.
GP284881.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
Sequence 2308 from patent US 7507875.
GP285070.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
Sequence 1787 from patent US 8110723.
GZ147907.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
Sequence 2308 from patent US 8110723.
GZ148096.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
Sequence 1787 from Patent EP1639089.
HH971997.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
Sequence 2308 from Patent EP1639089.
HH972509.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
Sequence 1787 from patent US 8962947.
HK479791.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
Sequence 2308 from patent US 8962947.
HK479980.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
JP 2011087577-A/932: TRANSCRIPTION FACTORS.
HV336838.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
JP 2011087577-A/1121: TRANSCRIPTION FACTORS.
HV337027.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
JP 2011229530-A/932: TRANSCRIPTION FACTORS.
HV545576.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
JP 2011229530-A/1121: TRANSCRIPTION FACTORS.
HV545765.1:818-839
TCCTGTAATAATCTGGACTCCTATGCATGC818GACAGGAAGGTGCTAAAGGCCGTCTTGAACCAGCTCACTGAGATGGACTCGC
EG_Ba032H22.F EG_Ba Eucalyptus grandis genomic 5', genomic survey sequence.
JM738811.1:46-67
GCGAGTCCATCTCAGTGAGCTGGTTCAAGA46CGGCCTTTAGCACCTTCCTGTCGCATGCATAGGAGTCCAGATTATTACAGGA
EG_Ba067G24.F EG_Ba Eucalyptus grandis genomic 5', genomic survey sequence.
JM776469.1:68-89
GCGAGTCCATCTCAGTGAGCTGGTTCAAGA68CGGCCTTTAGCACCTTCCTGTCGCATGCATAGGAGTCCAGATTATTACAGGA
EG_Ba121K06.R EG_Ba Eucalyptus grandis genomic 3', genomic survey sequence.
JM779100.1:24-45
CTTCCTTCGCGTGCTGGTTCAGA24CGGCCTTTAGCACCTTCCTGTCGCATGCATAGGAGTCCAGATTATTACAGGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GACAGGAAGGTGCTAAAGGCCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GACAGGAAGGTGCTAAAGGCCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.408 | 0.399 | search_plus_done; http://172.18.8.135:50400/match?q=GACAGGAAGGTGCTAAAGGCCG&k=0&no_gap=0&offset=0&limit=50
0.546 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=CGGCCTTTAGCACCTTCCTGTC&k=0&no_gap=0&offset=0&limit=36
0.548 | 0.002 | cgi_end;

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