GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 15:11:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Labrus mixtus genome assembly, chromosome: 6.
OY757289.1:12092978-12092997
AAAAATGTTTATTACTGTTGCAACCATAAA12092978GACATAGCTGCAATTCCAAGCAGCACTTCAGAGTGTTTCTCTACTCACAT
Symphodus melops genome assembly, chromosome: 15.
OX393539.1:16472274-16472293
ATGTGAGTAGAGAAACACTCTCAAGTGCTG16472274CTTGGAATTGCAGCTATGTCTTTATGGTTACAATAGTAATAAACATTTTT
Labrus bergylta genome assembly, chromosome: 10.
OZ005718.1:19625474-19625493
ATGTGAGTAGAGAAACACTCTGAAGTGCTG19625474CTTGGAATTGCAGCTATGTCTTTATGGTTACAACAGCAATAAACATTTTT
454GmaGlobSeed486168 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD743519.1:21-40
GCTTTTCTAAACAGTTGTAT21CTTGGAATTGCAGCTATGTCCTTGCCATTGAATTTCAACAGCAAGTTGTT
454GmaGlobSeed634513 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
GD891864.1:21-40
GCTTTTCTAAACAGTTGTAT21CTTGGAATTGCAGCTATGTCCTTGCCATTGAATTTCAACAAGACAAAGTT
Lotus japonicus genomic DNA, chromosome 5, clone: LjT21E22, TM0494.
AP007389.2:82039-82058
TCTGCTACTGAATGACATTCTATAATTTCT82039CTTGGAATTGCAGCTATGTCCTTGCAGCTGAGTTTCAACAGCAAGTTATT
Lotus japonicus genomic DNA, chromosome 5, clone: LjB11K16, BM1460.
AP010471.1:36860-36879
TCTGCTACTGAATGACATTCTATAATTTCT36860CTTGGAATTGCAGCTATGTCCTTGCAGCTGAGTTTCAACAGCAAGTTATT
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:45760342-45760361
TCTGCTACTGAATGACATTCTATAATTTCT45760342CTTGGAATTGCAGCTATGTCCTTGCAGCTGAGTTTCAACAGCAAGTTATT
Glycine max cultivar Williams 82 chromosome 13.
CP126438.1:23539754-23539773
ATAAGTTGATGCTTTTCTAAACAGTTGTAT23539754CTTGGAATTGCAGCTATGTCCTTGCCATTGAATTTCAACAGCAAGTTGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GACATAGCTGCAATTCCAAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GACATAGCTGCAATTCCAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.112 | 0.104 | search_plus_done; http://172.18.8.135:50400/match?q=GACATAGCTGCAATTCCAAG&k=0&no_gap=0&offset=0&limit=50
0.303 | 0.190 | search_minus_done; http://172.18.8.135:50400/match?q=CTTGGAATTGCAGCTATGTC&k=0&no_gap=0&offset=0&limit=49
0.308 | 0.005 | cgi_end;

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