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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-09 17:42:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

LJSB380F LIB-EST LJSB (Longjing 43 sprouting buds) Camellia sinensis subtractive cDNA library Camellia sinensis cDNA clone SB380, mRNA sequence.
JZ485988.1:53-72
AGCGGAGAGGATGAAGAGCGGGGCGAAGAA53GACCCTTCCGAGGAACGAGAGGAAGCCCATTACTGGTTTTTTGAGAGACA
TSA: Camellia sinensis tea_rep_c24254 mRNA sequence.
KA302615.1:621-640
AGCGGAGAGGATGAAGAGAGAGGCGAAGAA621GACCCTTCCGAGGAACGAGAGGAAGCCCATTATTGGATTTTTGTAGAGAC
EG_Bb092O17.R EG_Bb Eucalyptus grandis genomic 3', genomic survey sequence.
JM504061.1:64-83
TGCGGAGAGCAGGAAGAAGGACGCGAAGAG64GACCCTTCCGAGGAACGAGAAGAAACCCATTTCCCTTCCTCGCTATTCCC
Eucalyptus gunnii EST from cold-acclimated leaves (from plantlets in controlled conditions and trees in field trials).
CU403981.1:120-139
GGGAATAGCGAGGAAGGGAAATGGGTTTCT120TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTCCTCTCCGCA
Camellia sinensis mRNA, clone: SS20G04, 5' end sequence, expressed in shoot stems.
FS953623.1:65-84
GTCTCTCAAAAAAACCAGTAATGGGCTTCC65TCTCGTTCCTCGGAAGGGTCTTCTTCGCCTCGCTCTTCATCCTCTCCGCT
Eucalyptus camaldulensis mRNA, clone: Leaf_004_000038C08, 3'-EST.
FY798383.1:48-67
GGGAATAGCGAGGAAGGGAAATGGGTTTCT48TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
Eucalyptus camaldulensis mRNA, clone: Leaf_004_000038E06, 3'-EST.
FY798406.1:48-67
GGGAATAGCGAGGAAGGGAAATGGGTTTCT48TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
Eucalyptus camaldulensis mRNA, clone: Leaf_004_000056G07, 3'-EST.
FY800254.1:48-67
GGGAATAGCGAGGAAGGGAAATGGGTTTCT48TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
Eucalyptus camaldulensis mRNA, clone: Root_002_000018G11, 3'-EST.
FY808035.1:53-72
GGGAAAAGCGAGGAAGGGAAATGGGTTTCT53TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
Eucalyptus camaldulensis mRNA, clone: Root_002_000042G12, 3'-EST.
FY810446.1:48-67
GGGAATAGCGAGGAAGGGAAATGGGTTTCT48TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
Eucalyptus camaldulensis mRNA, clone: Root_003_000021C08, 3'-EST.
FY814342.1:48-67
GGGAAAAGCGAGGAAGGGAAATGGGTTTCT48TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
Eucalyptus camaldulensis mRNA, clone: Root_003_000038B08, 3'-EST.
FY816266.1:93-112
GGGAAAAGCGAGGAAGGGAAATGGGTTTCT93TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
Eucalyptus camaldulensis mRNA, clone: Stem_001_000161C12, 3'-EST.
FY824988.1:102-121
GGGAATAGCGAGGAAGGGAAATGGGTTTCT102TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
Eucalyptus camaldulensis mRNA, clone: Stem_001_000165A12, 3'-EST.
FY825286.1:48-67
GGGAATAGCGAGGAAGGGAAATGGGTTTCT48TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
Eucalyptus camaldulensis mRNA, clone: Stem_001_000169H02, 3'-EST.
FY825671.1:32-51
GGGAATAGCGAGGAAGGGAAATGGGTTTCT32TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
EST2798 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 08010904-OUYI_CHAG_31_83.M13+_C11, mRNA sequence.
GE652471.1:84-103
TGTCTCTCAAAAATCCAATAATGGGCTTCC84TCTCGTTCCTCGGAAGGGTCTTCTTCGCCTCTCTCTTCATCCTCTCCGCT
EST3438 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone OUYI_CG_92.M13+_D12, mRNA sequence.
GE653111.1:127-146
TGTCTCTCAAAAATCCAGTAATGGGCTTCC127TCTCGTTCCTCGGAAGGGTCTTCTTCGCCTCTCTCTTCATCCTCTCCGCT
ERB01_14_04_C19_B01_007 Ribes nigrum Ben Hope pooled bud (SCRI_Rn_bud_cDNA) Ribes nigrum cDNA, mRNA sequence.
GT024484.1:63-82
GCTCTCTCTGTATTGCTGCAATGGGTTTCT63TCTCGTTCCTCGGAAGGGTCCTCTTCGCCTCTCTCTTCATCCTCTCAGCA
ERB01_15_02_G11_D09_037 Ribes nigrum Ben Hope pooled bud (SCRI_Rn_bud_cDNA) Ribes nigrum cDNA, mRNA sequence.
GT024691.1:17-36
GCTGCAATGGGTTTCT17TCTCGTTCCTCGGAAGGGTCCTCTTCGCCTCTCTCTTCATCCTCTCAGCA
GR-ML-001-BA-014-F06 Mature leaves (EUGR-ML) Eucalyptus grandis cDNA clone GR-ML-001-BA-014-F06 5', mRNA sequence.
HO765458.1:144-163
GGGAAAAGCGAGGAAGGGAAATGGGTTTCT144TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA
GR-TS-002-CN-001-E04 Treated seedlings (EUGR-TS) Eucalyptus grandis cDNA clone GR-TS-002-CN-001-E04 5', mRNA sequence.
HS063408.1:168-187
GGGAATAGCGAGGAAGGGAAATGGGTTTCT168TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTCCTCTCCGCA
GR-TS-002-CN-035-A05 Treated seedlings (EUGR-TS) Eucalyptus grandis cDNA clone GR-TS-002-CN-035-A05 5', mRNA sequence.
HS065353.1:113-132
GGGAATAGCGAGGAAGGGAAATGGGTTTCT113TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTCCTCTCCGCA
Tea254_2006-04-20_1/Tea254_H04_1 Camellia sinensis (tea) cultivar TRI2043 EST library Camellia sinensis cDNA, mRNA sequence.
JK478233.1:118-137
TGTCTCTCAAAAATCCAATAATGGGCTTCC118TCTCGTTCCTCGGAAGGGTCTTCTTCGCCTCTCTCTTCATCCTCTCCGCT
GL-XY-001_AF-089b_B01 Xylem vascular tissue, differentiating (EUGL-XY) Eucalyptus globulus cDNA clone GL-XY-001_AF-089b_B01 5', mRNA sequence.
JK640055.1:129-148
GGGAATAGCGAGGAAGGGAAATGGGTTTCT129TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTCCTCTCCGCA
GL-XY-001_AF-089c_B01 Xylem vascular tissue, differentiating (EUGL-XY) Eucalyptus globulus cDNA clone GL-XY-001_AF-089c_B01 5', mRNA sequence.
JK640148.1:129-148
GGGAATAGCGAGGAAGGGAAATGGGTTTCT129TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTCCTCTCCGCA
GL-XY-001_CN-051_C09 Xylem vascular tissue, differentiating (EUGL-XY) Eucalyptus globulus cDNA clone GL-XY-001_CN-051_C09 5', mRNA sequence.
JK642583.1:91-110
GGGAATAGCGAGGAAGGGAAATGGGTTTCT91TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTCCTCTCCACA
GL-XY-001_CN-066_B04 Xylem vascular tissue, differentiating (EUGL-XY) Eucalyptus globulus cDNA clone GL-XY-001_CN-066_B04 5', mRNA sequence.
JK643501.1:107-126
GGGAATAGCGAGGAAGGGAAATGGGTTTCT107TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTCCTCTCCACA
UR-XY-001_BA-035_F07 Xylem vascular tissue, differentiating (EUUR-XY) Eucalyptus urophylla cDNA clone UR-XY-001_BA-035_F07 5', mRNA sequence.
JK682864.1:86-105
GGGAATAGCGAGGAAGGGAAATGGGTTTCT86TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTCCTCTCCGCA
Camellia_11 Dixie Knight seed cDNA library Camellia japonica cDNA, mRNA sequence.
JK711057.1:110-129
TGTCTCTCAAAAAACCAGTAATGGGCTTCC110TCTCGTTCCTCGGAAGGGTCTTCTTTGCCTCTCTCTTCATCCTCTCCGCT
TSA: Camellia sinensis Singletons23702.Casi mRNA sequence.
HP738523.1:164-183
GTCTCTCAAAAAAACCAGTAATGGGCTTCC164TCTCGTTCCTCGGAAGGGTCTTCTTCGCCTCGCTCTTCATCCTCTCCGCT
EG_Bb126F15.R EG_Bb Eucalyptus grandis genomic 3', genomic survey sequence.
JM546755.1:230-249
GGGAATAGCGAGGAAGGGAAATGGGTTTCT230TCTCGTTCCTCGGAAGGGTCCTCTTCGCGTCCTTCTTCCTGCTCTCCGCA

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