GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:58:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

FGAS001325 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum cDNA, mRNA sequence.
CK192919.1:642-660
CGGTGGTTCGACTATTTCCCGGGAATTCCG642GACCGGTTCCACCCTTTTTTTTTTGTCAAACTTGTTTTTTAGTGTTCCC
FGAS027586 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum aestivum cDNA, mRNA sequence.
CK215619.1:1101-1119
CCCTTGGTCCAAAAATTCCCGGAATATTCC1101GACCGGTTCCACCCTTTTTGTTTGGTAACAATTTTTC
Quercus dentata isolate Qdleaves-2020 chromosome 8.
CP116451.1:44691343-44691361
AATAAATGTCATTCTTGCCATACCTGGGAG44691343GACCGGTTCCACCCTTTTTCGAGTAATGTCGGTGGGTAGGTTCCCGACC
Leistus spinibarbis genome assembly, chromosome: 19.
OW121810.1:602266-602284
TCCCCTTGACGCTAACCAGGACATATGCAG602266GACCGGTTCCACCCTTTTTTAATATATTAAAGTGAAAATTGATTTTGGT
Coregonus sp. 'balchen' genome assembly, chromosome: 25.
LR778277.1:20873776-20873794
CCGAAATTGGTTCACCGGGGCCTTTCCCCG20873776AAAAAGGGTGGAACCGGTCCCAGTTGCAAGGTCCCCCTGCTTCTTTTCG
Stomoxys calcitrans genome assembly, chromosome: 1.
OY720435.1:212695200-212695218
ATAGTTTCTGATATGGCGCCCTACATTCAA212695200AAAAAGGGTGGAACCGGTCTATAGCCATATAAAGCACTCATTAAACCCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GACCGGTTCCACCCTTTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GACCGGTTCCACCCTTTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.372 | 0.363 | search_plus_done; http://172.18.8.135:50400/match?q=GACCGGTTCCACCCTTTTT&k=0&no_gap=0&offset=0&limit=50
0.462 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=AAAAAGGGTGGAACCGGTC&k=0&no_gap=0&offset=0&limit=46
0.463 | 0.001 | cgi_end;

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