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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-07 15:33:36, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Raphanus sativus RS18883 mRNA sequence.
JT803430.1:1788-1807
GCTCCATGACCACTACTAGGCTTTCGAGTG1788GACGACGACATCTGAAGCAAAAATAGATAATCTACACCGAACAGGAAAGG
Rhagonycha lutea genome assembly, chromosome: 2.
OY294037.1:13685980-13685999
AAACGATTCACAGAAGGCATAGTGATAATG13685980GACGACGACATCTGAAGCAATTACTGAAGAAAACATTGAAAAGTGCTTGA
Elaphria venustula genome assembly, chromosome: 18.
OZ209965.1:6356778-6356797
GGCACGTAATCTTCGTCACTCTCACTGCCT6356778GACGACGACATCTGAAGCAAGAGAAGAAATTTTAAAATAAAAAATAGTAA
Raphanus sativus mRNA, clone: RSCS07H02, 5' end sequence.
FY448412.1:216-235
CCTTTCCTGTTCGGTGTAGATTATCTATTT216TTGCTTCAGATGTCGTCGTCCACTCGAAAGCCTAGTAGTGGTCATGGAGC
TSA: Raphanus sativus var. sativus RNA, contig: WG3_1438.
FX660134.1:252-271
CCTTTCCTGTTCGGTGTAGATTATCTATTT252TTGCTTCAGATGTCGTCGTCCACTCGAAAGCCTAGTAGTGGTCATGGAGC
Eupithecia linariata genome assembly, chromosome: 2.
OZ203625.1:286349-286368
TATCTTCAGCAGCTTCCAATAACTTATTGT286349TTGCTTCAGATGTCGTCGTCGCCGAGAATTGCGCATTAGCCACAAGTGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GACGACGACATCTGAAGCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GACGACGACATCTGAAGCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.385 | 0.376 | search_plus_done; http://172.18.8.135:50900/match?q=GACGACGACATCTGAAGCAA&k=0&no_gap=0&offset=0&limit=50
0.741 | 0.356 | search_minus_done; http://172.18.8.135:50900/match?q=TTGCTTCAGATGTCGTCGTC&k=0&no_gap=0&offset=0&limit=47
0.744 | 0.002 | cgi_end;

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