GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 15:26:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Prunus mume strain dayezhugan clone P01 SSR marker genomic sequence.
GU458002.1:1-19
1GACGAGTTTATCGTTGACTGGGAAGGGTGGGGTGACGAGCTTGTCGGTT
Prunus mume strain hongmei clone P02 SSR marker genomic sequence.
GU458003.1:1-19
1GACGAGTTTATCGTTGACTGGGAAGGGTGGGGTGACGAGCTTGTCGGTT
Melanargia galathea genome assembly, chromosome: 15.
OV049870.1:18833875-18833893
ATTCATGTTTGCGTGCGTTGGCGAGAACGA18833875GACGAGTTTATCGTTGACTGCGAGTGGCGATTCGAGACGCAAGGACGAA
Sepia lycidas genome assembly, chromosome: 21.
OZ010591.1:13957346-13957364
GTGCGATTTTCGCTTCCAGCGTCTCGTATG13957346GACGAGTTTATCGTTGACTGGAAACCTTCGTATGTAAACAAAAACTGAC
Pm_1572 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW870146.1:394-412
AACCGACAAGCTCGTCACCCCACCCTTCCC394AGTCAACGATAAACTCGTCAATGGCGACCGTCCGATCAACGATCCTCCT
Pm_2524 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW871098.1:318-336
AACCGACAAGCTCGTCACCCCACCCTTCCC318AGTCAACGATAAACTCGTCAATGGCGACCGTCCGATCAACGATCCTCCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GACGAGTTTATCGTTGACT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GACGAGTTTATCGTTGACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.113 | 0.104 | search_plus_done; http://172.18.8.135:50400/match?q=GACGAGTTTATCGTTGACT&k=0&no_gap=0&offset=0&limit=50
0.419 | 0.306 | search_minus_done; http://172.18.8.135:50400/match?q=AGTCAACGATAAACTCGTC&k=0&no_gap=0&offset=0&limit=46
0.421 | 0.002 | cgi_end;

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