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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-07 03:14:30, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_15927.
FX700372.1:1105-1125
GCCACGACGGCTCTGCTTCCGGAACTCTCC1105GACTCGTCTGTGTTCTTCATCGGTGCCACTAAATCCACGACGGAGGATCGA
KBrB080J08F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB080J08, genomic survey sequence.
DX070982.1:493-513
GCCACGACGGCTCTGCTTCCGGAACTCTCC493GACTCGTCTGTGTTCTTCATCGGTGCCACTAAATCCACGACGGAGGATCGA
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:34139836-34139856
GCCACGACGGCTCTGCTTCCGGAACTCTCC34139836GACTCGTCTGTGTTCTTCATCGGTGCCACTAAATCCATGACGGAGGATCGA
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:54615578-54615598
GCCACGACGGCTCTGCTGCCGGAACTCTCC54615578GACTCGTCTGTGTTCTTCATCGGTACCAAATCCACGACGGAGGATCAGAAA
Pherbellia schoenherri genome assembly, chromosome: 3.
OZ289139.1:22923161-22923181
GTTCACCTTCATTTGGCTTCGTTAGAATTC22923161GACTCGTCTGTGTTCTTCATCGTTTTTATTCGGAGTCCTTGGCTTATCTTC
Pherbellia schoenherri genome assembly, chromosome: 4.
OZ289140.1:2250300-2250320
GTTTACCTTCGTTTGGCTTCGTTAGAGTTC2250300GACTCGTCTGTGTTCTTCATCGTTTTAGTTCGTAGACCTCTTAGTTTATCG
39RDBRT_UP_069_H09_30NOV2005_065 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
EE530003.1:104-124
TCGATCCTCCGTCGTGGATTTAGTGGCACC104GATGAAGAACACAGACGAGTCGGAGAGTTCCGGAAGCAGAGCCGTCGTGGC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_81081.
FX786462.1:90-110
TCGATCCTCCGTCGTGGATTTAGTGGCACC90GATGAAGAACACAGACGAGTCGGAGAGTTCCGGAAGCAGAGCCGTCGTGGC
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 882 unordered pieces.
FJ789639.1:2645727-2645747
TCGATCCTCCGTCGTGGATTTAGTGGCACC2645727GATGAAGAACACAGACGAGTCGGAGAGTTCCGGAAGCAGAGCCGTCGTGGC
Brassica napus cultivar Xiang5A chromosome 7.
CP151902.1:2290018-2290038
TCGATCCTCCGTCATGGATTTAGTGGCACC2290018GATGAAGAACACAGACGAGTCGGAGAGTTCCGGAAGCAGAGCCGTCGTGGC
Brassica napus cultivar Xiang5A chromosome 17.
CP151912.1:7191483-7191503
TTTCTGATCCTCCGTCGTGGATTTGGTACC7191483GATGAAGAACACAGACGAGTCGGAGAGTTCCGGCAGCAGAGCCGTCGTGGC
Brassica napus genome assembly, chromosome: A07.
HG994361.1:2498936-2498956
TCGATCCTCCGTCATGGATTTAGTGGCACC2498936GATGAAGAACACAGACGAGTCGGAGAGTTCCGGAAGCAGAGCCGTCGTGGC
Brassica napus genome assembly, chromosome: C07.
HG994371.1:7085936-7085956
TTTCTGATCCTCCGTCGTGGATTTGGTACC7085936GATGAAGAACACAGACGAGTCGGAGAGTTCCGGCAGCAGAGCCGTCGTGGC
Brassica rapa genome, scaffold: A07.
LR031574.1:2509796-2509816
TCGATCCTCCGTCGTGGATTTAGTGGCACC2509796GATGAAGAACACAGACGAGTCGGAGAGTTCCGGAAGCAGAGCCGTCGTGGC
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:8390915-8390935
TTTCTGATCCTCCGTCGTGGATTTGGTACC8390915GATGAAGAACACAGACGAGTCGGAGAGTTCCGGCAGCAGAGCCATCGTGGC
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:2521600-2521620
TCGATCCTCCGTCGTGGATTTAGTGGCACC2521600GATGAAGAACACAGACGAGTCGGAGAGTTCCGGAAGCAGAGCCGTCGTGGC
Brassica oleracea genome assembly, chromosome: 7.
OZ281590.1:7059379-7059399
TTTCTGATCCTCCGTCGTGGATTTGGTACC7059379GATGAAGAACACAGACGAGTCGGAGAGTTCCGGCAGCAGAGCCGTCGTGGC
Brassica oleracea genome assembly, chromosome: 7.
OZ281600.1:7465523-7465543
TTTCTGATCCTCCGTCGTGGATTTGGTACC7465523GATGAAGAACACAGACGAGTCGGAGAGTTCCGGCAGCAGAGCCGTCGTGGC
Brassica rapa subsp. trilocularis genome assembly, chromosome: 7.
OZ282421.1:2377847-2377867
TCGATCCTCCGTCGTGGATTTAGTGGCACC2377847GATGAAGAACACAGACGAGTCGGAGAGTTCCGGAAGCAGAGCCGTCGTGGC
Brassica oleracea var. botrytis genome assembly, chromosome: 7.
OZ282432.1:4118343-4118363
TTTCTGATCCTCCGTCGTGGATTTGGTACC4118343GATGAAGAACACAGACGAGTCGGAGAGTTCCGGCAGCAGAGCCATCGTGGC
Brassica rapa subsp. narinosa genome assembly, chromosome: 7.
OZ282448.1:2458230-2458250
TCGATCCTCCGTCGTGGATTTAGTGGCACC2458230GATGAAGAACACAGACGAGTCGGAGAGTTCCGGAAGCAGAGCCGTCGTGGC
Sepia esculenta genome assembly, chromosome: 42.
OZ038516.1:39148379-39148399
TCTGTCGGTGAGTTATTCCCATCTCTGTTT39148379GATGAAGAACACAGACGAGTCCGAAAATTCCGAACTTAAGACTTTTCTTCC
Pherbellia schoenherri genome assembly, chromosome: 2.
OZ289138.1:128071063-128071083
GAAAAAAAACCGAGGACTCCGAATAAAAAC128071063GATGAAGAACACAGACGAGTCCAACGAAGCCTTACGAAGGTAAACCGAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GACTCGTCTGTGTTCTTCATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GACTCGTCTGTGTTCTTCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.263 | 0.254 | search_plus_done; http://172.18.8.135:50900/match?q=GACTCGTCTGTGTTCTTCATC&k=0&no_gap=0&offset=0&limit=50
0.581 | 0.318 | search_minus_done; http://172.18.8.135:50900/match?q=GATGAAGAACACAGACGAGTC&k=0&no_gap=0&offset=0&limit=44
0.593 | 0.012 | cgi_end;

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