GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 15:05:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:8996063-8996084
ATGGCATTTGCAATAATGTCAGTCATGAAG8996063GACTTATCCATGTCCGAAAAGCCATTAGGCTGGTAAGGTAAATTGGGCATGG
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:8637883-8637904
ATGGCATTTGCAATAATGTCAGTCATGAAG8637883GACTTATCCATGTCCGAAAAGCCATTAGGCTGGTAAGGTAAATTGGGCATGG
Malus baccata partial hdg11 gene for putative homeobox-leucine zipper protein HDG11-like, exons 1-2.
LM999991.1:1-22
1GACTTATCCATGTCCGAAAAGCCATTAGGCTGGTAAGGTAAATTGGGCATGG
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:8915224-8915245
ATGGCATTTGCAATAATGTCAGTCATGAAG8915224GACTTATCCATGTCCGAAAAGCCATTAGGCTGGTAAGGTAAATTGGGCATGG
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:23277010-23277031
CCATGCCCAATTTACCTTACCAGCCTAATG23277010GCTTTTCGGACATGGATAAGTCCTTCATGACTGAGATTATTGCAAATGCCAT
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:23773862-23773883
CCATGCCCAATTTACCTTACCAGCCTAATG23773862GCTTTTCGGACATGGATAAGTCCTTCATGACTGACATTATTGCAAATGCCAT
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:23470142-23470163
CCATGCCCAATTTACCTTACCAGCCTAATG23470142GCTTTTCGGACATGGATAAGTCCTTCATGACTGACATTATTGCAAATGCCAT
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:23458217-23458238
CCATGCCCAATTTACCTTACCAGCCTAATG23458217GCTTTTCGGACATGGATAAGTCCTTCATGACTGACATTATTGCAAATGCCAT
Malus domestica genome assembly, chromosome: 12.
OU696688.1:23132399-23132420
CCATGCCCAATTTACCTTACCAGCCTAATG23132399GCTTTTCGGACATGGATAAGTCCTTCATGACTGACATTATTGCAAATGCCAT
Malus domestica genome assembly, chromosome: 12.
OU744553.1:23532024-23532045
CCATGCCCAATTTACCTTACCAGCCTAATG23532024GCTTTTCGGACATGGATAAGTCCTTCATGACTGACATTATTGCAAATGCCAT
Malus domestica genome assembly, chromosome: 12.
OU744964.1:23059047-23059068
CCATGCCCAATTTACCTTACCAGCCTAATG23059047GCTTTTCGGACATGGATAAGTCCTTCATGACTGACATTATTGCAAATGCCAT
Malus domestica genome assembly, chromosome: 12.
OU745002.1:22760313-22760334
CCATGCCCAATTTACCTTACCAGCCTAATG22760313GCTTTTCGGACATGGATAAGTCCTTCATGACTGACATTATTGCAAATGCCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GACTTATCCATGTCCGAAAAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GACTTATCCATGTCCGAAAAGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=GACTTATCCATGTCCGAAAAGC&k=0&no_gap=0&offset=0&limit=50
0.127 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTTTCGGACATGGATAAGTC&k=0&no_gap=0&offset=0&limit=46
0.132 | 0.005 | cgi_end;

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