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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-11 10:04:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Acomys russatus genome assembly, chromosome: 14.
LR877225.1:36767971-36767990
ATAAATCAATGTGCGAGTAGCCTGGAGACA36767971GACTTGGCTGAGGACAGTAGTCTTTAAGAGGAACCAGTGGCGCCCTGCTT
Acomys kempi genome assembly, chromosome: 8.
OU015362.1:99877429-99877448
GTAAATCAGTGCGCGAGTAGCCTGGAGACA99877429GACTTGGCTGAGGACAGTAGTCTTTAAGAGGAACCAGTGGCGCCCTGCTT
Acomys dimidiatus genome assembly, chromosome: 8.
OU015381.1:99551436-99551455
GTAAATCAGTGCACGAGTAGCCTGGAGACA99551436GACTTGGCTGAGGACAGTAGTCTTTAAGAGGAACCAGTGACGCCCTGCTT
Acomys percivali genome assembly, chromosome: 8.
OU015749.1:100734125-100734144
ATAAATCAATGTGCGAGTAGCCTGGAGACA100734125GACTTGGCTGAGGACAGTAGTCTTTAAGAGGAACCAGTGGCGCCCTGCTT
Hyperoplus immaculatus genome assembly, chromosome: 3.
OX442351.1:27416073-27416092
AGTTTTATAAGTTGGCTCCACTCATTCTGG27416073CTACTGTCCTCAGCCAAGTCATTAAAAAAATTCCCCTATAATTTTTAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GACTTGGCTGAGGACAGTAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GACTTGGCTGAGGACAGTAG | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.394 | 0.386 | search_plus_done; http://172.18.8.135:50400/match?q=GACTTGGCTGAGGACAGTAG&k=0&no_gap=0&offset=0&limit=50
0.495 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=CTACTGTCCTCAGCCAAGTC&k=0&no_gap=0&offset=0&limit=46
0.496 | 0.001 | cgi_end;

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