GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-16 16:55:41, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:4471174-4471193
TGACATAGAGACTGGTGAAATGGTGAGGAA4471174GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTACTCTCTCTCTCTCT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:35841178-35841197
TGACGTAGAGACTGGTGAAATCGTGATGAA35841178GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTATTCTCTCTCTCTCT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:36011592-36011611
TGACGTAGAGACTGGTGAAATCGTGATGAA36011592GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTATTCTCTCTCTCTCT
Arachis hypogaea cultivar Yunnan Rainbow Peanut chromosome 04.
CP156091.1:4218449-4218468
TGACATAGAGACTGGTGAAATGGTGAGGAA4218449GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTACTCTCTCTCTCTCT
Arachis hypogaea cultivar Yunnan Rainbow Peanut chromosome 13.
CP156100.1:36368952-36368971
TGACGTAGAGACTGGTGAAATCGTGATGAA36368952GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTATTCTCTCTCTCTCT
Arachis hypogaea cultivar Huayu23 chromosome 04.
CP156111.1:4883186-4883205
TGACATAGAGACTGGTGAAATGGTGAGGAA4883186GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTACTCTCTCTCTCTCT
Arachis hypogaea cultivar Huayu23 chromosome 13.
CP156120.1:36450684-36450703
TGACGTAGAGACTGGTGAAATCGTGATGAA36450684GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTATTCTCTCTCTCTCT
Arachis hypogaea cultivar Chedouzi chromosome 04.
CP156131.1:4882895-4882914
TGACATAGAGACTGGTGAAATGGTGAGGAA4882895GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTACTCTCTCTCTCTCT
Arachis hypogaea cultivar Chedouzi chromosome 13.
CP156140.1:36318853-36318872
TGACGTAGAGACTGGTGAAATCGTGATGAA36318853GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTATTCTCTCTCTCTCT
Arachis hypogaea cultivar Laiyang Silihong chromosome 04.
CP156151.1:4210616-4210635
TGACATAGAGACTGGTGAAATGGTGAGGAA4210616GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTACTCTCTCTCTCTCT
Arachis hypogaea cultivar Laiyang Silihong chromosome 13.
CP156160.1:36360101-36360120
TGACGTAGAGACTGGTGAAATCGTGATGAA36360101GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTATTCTCTCTCTCTCT
Arachis ipaensis isolate Y4 chromosome 3.
CP160332.1:36436945-36436964
TGACGTAGAGACTGGTGAAATCGTGATGAA36436945GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTATTCTCTCTCTCTCT
Larinioides cornutus genome assembly, chromosome: 1.
OZ204530.1:165712280-165712299
TCGTCGTCATCAGCGATCCAAAGCTGGTGC165712280GAGAAGCCTTCAAGCAGTCGATCTTTTCTGGCAGGCCCGACACCGGTCTC
Arachis hypogaea DNA, clone: AHGS41B21.
DH961623.1:301-320
AGAGAGAGAGAGAGTAACCCTACCCTTAAA301CGACTGCTTGAAGGCTTCTCTTCCTCACCATTTCACCAGCCTCTATGTCT
Odontomyia ornata genome assembly, chromosome: 4.
OZ017741.1:102731588-102731607
AGGAAAGGGAAGAATCTCAAGACAACTTCG102731588CGACTGCTTGAAGGCTTCTCACCGTTGGGGGAACCTGGCGAAATTTCTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGAAGCCTTCAAGCAGTCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGAAGCCTTCAAGCAGTCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.234 | 0.225 | search_plus_done; http://172.18.8.135:50800/match?q=GAGAAGCCTTCAAGCAGTCG&k=0&no_gap=0&offset=0&limit=50
0.386 | 0.152 | search_minus_done; http://172.18.8.135:50800/match?q=CGACTGCTTGAAGGCTTCTC&k=0&no_gap=0&offset=0&limit=37
0.387 | 0.002 | cgi_end;

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