GGGenome | Results

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2025-04-09 09:36:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:4471174-4471193

TGACATAGAGACTGGTGAAATGGTGAGGAA4471174GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTACTCTCTCTCTCTCT

Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:35841178-35841197

TGACGTAGAGACTGGTGAAATCGTGATGAA35841178GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTATTCTCTCTCTCTCT

Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:36011592-36011611

TGACGTAGAGACTGGTGAAATCGTGATGAA36011592GAGAAGCCTTCAAGCAGTCGTTTAAGGTTAGGGCTATTCTCTCTCTCTCT

Arachis hypogaea DNA, clone: AHGS41B21.
DH961623.1:301-320

AGAGAGAGAGAGAGTAACCCTACCCTTAAA301CGACTGCTTGAAGGCTTCTCTTCCTCACCATTTCACCAGCCTCTATGTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.101 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=GAGAAGCCTTCAAGCAGTCG&k=0&no_gap=0&offset=0&limit=50
0.146 | 0.045 | search_minus_done; http://172.18.8.135:50400/match?q=CGACTGCTTGAAGGCTTCTC&k=0&no_gap=0&offset=0&limit=47
0.147 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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