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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 18:59:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys leucogaster genome assembly, chromosome: 12.
OX460382.1:15063575-15063594
GACACTGAGAGAGACCATGTGGAGGACAGA15063575GAGAATACGGAGAGAGAGAGTGGGAAGGCATGTCCGCTTTTTAGGGTGGG
Peromyscus eremicus genome assembly, chromosome: 7.
OX460400.1:48182826-48182845
GAGACAGACCGTGCGGAGGGGAAATACAGA48182826GAGAATACGGAGAGAGAGAGCGGGAGGGCACGTCTGCTTTTTTAGGCTGG
Onychomys leucogaster genome assembly, chromosome: 12.
OX460429.1:7376672-7376691
GACACTGAGAGAGACCATGTGGAGGACAGA7376672GAGAATACGGAGAGAGAGAGTGGGAAGGCATGTCCGCTTTTTAGGGTGGG
Peromyscus eremicus genome assembly, chromosome: 7.
OX460472.1:47377139-47377158
GAGACAGACCGTGCGGAGGGGAAATACAGA47377139GAGAATACGGAGAGAGAGAGCGGGAGGGCACGTCTGCTTTTTTAGGCTGG
Orcinus orca genome assembly, chromosome: 13.
OW443373.1:83422972-83422991
CCTCTGCCCCTATAGTCTGACTGCAGCCAT83422972GAGAATACGGAGAGAGAGAGAAGGGCGGAGTGTGGCCCTTTCCTAAAGCG
Lagenorhynchus albirostris genome assembly, chromosome: 13.
OX459085.1:81143001-81143020
CCTCTGCCCCTATAGTCTGACTGCAGCCAT81143001GAGAATACGGAGAGAGAGAGAAGGGCGGAGTGTGGCCCTTTCCTAAAGCG
Delphinus delphis genome assembly, chromosome: 12.
OX465338.1:54076838-54076857
CCTCTGCCCCTATAATCTGACTGCAGCCAT54076838GAGAATACGGAGAGAGAGAGAAGGGCGGAGTGTGGCCCATTCCTAAAGCG
Stenella coeruleoalba genome assembly, chromosome: 13.
OX596398.1:81787117-81787136
CCTCTGCCCCTATAATCTGACTGCAGCCAT81787117GAGAATACGGAGAGAGAGAGAAGGGCGGAGTGTGGCCCTTTCCTAAAGCG
Globicephala melas genome assembly, chromosome: 12.
OY734051.1:81922475-81922494
CCTCTGCCCCTATAGTCTGACTGCAGCCAT81922475GAGAATACGGAGAGAGAGAGAAGGGCGGAGTGTGGCCCTTTCCTAAAGCG
Phocoena phocoena genome assembly, chromosome: 14.
OZ004771.1:81868245-81868264
CCTCTGCCCCTATAGTCTGACTGCAGCCAT81868245GAGAATACGGAGAGAGAGAGAAGGGAGGAGTGTGGCCCTTTCCTAAAGCG
Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:159231279-159231298
GAGGTCTGTAGCAGCAGATGACACAGCCCA159231279GAGAATACGGAGAGAGAGAGACTGGGATGTGAGTGCAGGTGCCAGAGTAG
Coregonus sp. 'balchen' genome assembly, chromosome: 20.
LR778272.1:12166093-12166112
GAGAGAGAAGAAGTGGTGCAGAGGAAGAGA12166093GAGAATACGGAGAGAGAGAGAGAAGAAGTGGTGCAGAGGAAGAGAGAGAA
Larimichthys crocea genome assembly, chromosome: VIII.
LT972197.1:3941701-3941720
AAAAAAAAAAGCTAAATCAAAACAAAGGCG3941701GAGAATACGGAGAGAGAGAGGAAAATGGCCACTATGAAGTCCAAAAATAG
Solea senegalensis genome assembly, chromosome: B.
OW185633.1:24356327-24356346
ACTGGATCTTGATCCTTCAACCTGCATGAT24356327GAGAATACGGAGAGAGAGAGAGAGAGAGCAAAGGAAGGAAGGACACAAAC
Solea senegalensis genome assembly, chromosome: C.
OW185634.1:22985147-22985166
ACTGGATCTTGATCCTTCAACCTGCATGAT22985147GAGAATACGGAGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAAC
Solea senegalensis genome assembly, chromosome: D.
OW185635.1:17399320-17399339
ACTGGATCTTGATCCTTCAACCTGCATGAT17399320GAGAATACGGAGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAAC
Solea senegalensis genome assembly, chromosome: E.
OW185636.1:28995342-28995361
ACTGGATCTTGATCCTTCAACCTGCATGAT28995342GAGAATACGGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAACTA
Solea senegalensis genome assembly, chromosome: F.
OW185637.1:3369867-3369886
ACTGGATCTTGATCCTTCAACCTGCATGAT3369867GAGAATACGGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAACTAGGGA
Solea senegalensis genome assembly, chromosome: G.
OW185638.1:11322500-11322519
ACTGGATCTTGATCCTTCAACCTGCATGAT11322500GAGAATACGGAGAGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAA
Solea senegalensis genome assembly, chromosome: G.
OW185638.1:26984045-26984064
ACTGGATCTTGATCCTGCAACCTGCATGAT26984045GAGAATACGGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAACTA
Solea senegalensis genome assembly, chromosome: H.
OW185639.1:967281-967300
ACTGGATCTTGATCCTTCAACCTGCATGAT967281GAGAATACGGAGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAAC
Solea senegalensis genome assembly, chromosome: H.
OW185639.1:12322354-12322373
ACTGGATCTTGATCCTTCAACCTGCATGAT12322354GAGAATACGGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAACTA
Solea senegalensis genome assembly, chromosome: I.
OW185640.1:30044930-30044949
ACTGGATCTTGATCCTGCAACCTGCATGAT30044930GAGAATACGGAGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAAC
Solea senegalensis genome assembly, chromosome: K.
OW185642.1:5641373-5641392
ACTGGATCTTGATCCTTCAACCTGCATGAT5641373GAGAATACGGAGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAAC
Solea senegalensis genome assembly, chromosome: P.
OW185647.1:1092582-1092601
ACTGGATCTTGATCCTTCAACCTGCATGAT1092582GAGAATACGGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAACTAGG
Solea senegalensis genome assembly, chromosome: R.
OW185649.1:20109991-20110010
ACTGGATCTTGATCCTTCAACCTGCATGAT20109991GAGAATACGGAGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAAC
Solea senegalensis genome assembly, chromosome: R.
OW185649.1:21878804-21878823
ACTGGATCTTGATCCTTCAACCTGCATGAT21878804GAGAATACGGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAACTA
Solea senegalensis genome assembly, chromosome: S.
OW185650.1:22884831-22884850
TTGCACAACATTAACGGAATGGAAAGAGGG22884831GAGAATACGGAGAGAGAGAGACAGACAGAGACAGAGAGAGAGACAGACAG
Solea senegalensis genome assembly, chromosome: T.
OW185651.1:145206-145225
ACTGGATCTTGATCCTTCAACCTGCATGAT145206GAGAATACGGAGAGAGAGAGAGAGGAGGGGAAGGAAGGAAGGACACAAAC
Solea senegalensis genome assembly, chromosome: U.
OW185652.1:22798435-22798454
ACTGGATCTTGATCCTTCAACCTGCATGAT22798435GAGAATACGGAGAGAGAGAGAGAGAGAGGGAAGGAAGGAAGGACACAAAC
Platichthys flesus genome assembly, chromosome: 13.
OX438728.1:4308784-4308803
GGAGCGACGCACAAAGAGAATCAGGTGGTT4308784GAGAATACGGAGAGAGAGAGACACTTTGAAGAGTGCCCCATAAATACTGG
Argentina silus genome assembly, chromosome: 4.
OX637371.1:12553569-12553588
ACTGACGCTCGGAGTGAGACGGGCACCTGG12553569GAGAATACGGAGAGAGAGAGAGAGAGAGAGGGAGTTGAGGAACAGGGGAT
Solea solea genome assembly, chromosome: 18.
OY282551.1:15269954-15269973
ACTGGATCTTGATCCTGCAACCTGCAAGAT15269954GAGAATACGGAGAGAGAGAGAGGGAAGGAAGGAAAGACACAAACTAGGGA
Conger conger genome assembly, chromosome: 16.
OY741329.1:10335255-10335274
GGCAGAAATGACCATAAGGAAAGAATGTGA10335255GAGAATACGGAGAGAGAGAGAGGGAGAGATGCAGAGAGAGAGAGGAGCTG
Sardina pilchardus genome assembly, chromosome: 6.
OY974091.1:26653899-26653918
AGAGAGAGAGGAGGTGCTGGGGTTAGAGTC26653899GAGAATACGGAGAGAGAGAGAGAGAGAGAACGAGGACAGAGAGAGAGAGA
Sardina pilchardus genome assembly, chromosome: 6.
OY974091.1:26653976-26653995
AGAGAGAGAGAGGGTGCTGGGGTTAGAGTC26653976GAGAATACGGAGAGAGAGAGAGAGAACTAGGACAGAGAGAGAGAGAGAGA
Sardina pilchardus genome assembly, chromosome: 6.
OY974091.1:26654047-26654066
AGAGAGAGAGGAGGTGCTGGGGTTAGAGTC26654047GAGAATACGGAGAGAGAGAGAGAGAGAGAGAACGAGGAGAGAGAGAGGGT
Sardina pilchardus genome assembly, chromosome: 6.
OY974091.1:26654112-26654131
GGAGAGAGAGAGGGTGCTGGGGTTAGAGTC26654112GAGAATACGGAGAGAGAGAGAGAGAACGAGGACAGAGAGAGAGAGAGAGA
Sardina pilchardus genome assembly, chromosome: 6.
OY974091.1:26654185-26654204
AGAGAGAGAGAGGGTGCTGGGGTTAGAGTC26654185GAGAATACGGAGAGAGAGAGAGAGAGAACGAGGACAGAGAGAAAGAGAGA
Sardina pilchardus genome assembly, chromosome: 6.
OY974091.1:26654260-26654279
AGAGAGAGAGAGGGTGCTGGGGTTAGAGTC26654260GAGAATACGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGGAAGA
Sardina pilchardus genome assembly, chromosome: 9.
OY974094.1:26388906-26388925
AACAAGCAAAGGGGTGGGTTAGAAACAAAT26388906GAGAATACGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
Chroicocephalus ridibundus genome assembly, chromosome: 14.
OZ001747.1:5108095-5108114
TGGGAAGAGGCTGAAAAAAGGTAAATATGG5108095GAGAATACGGAGAGAGAGAGGGTGTGCAGGAGCCGTGCTCATTTTTACAA
Mus musculus molossinus DNA, clone:MSMg01-217P21.TJ, genomic survey sequence.
AG397325.1:275-294
GAGGGAGAGAGAGGGGCGGGAGAGCGGGAT275GAGAATACGGAGAGAGAGAGAAGAATAATGGGGGTGGGGAGGGGCGTAAA
Pulicaria dysenterica genome assembly, chromosome: 7.
OX359294.1:50707715-50707734
GTGTGTGAGGTTGGCAAGAGGCCAGTTGTA50707715GAGAATACGGAGAGAGAGAGAGATGTGAGGGAGATATTCTTTTTGAAAAG
Persicaria maculosa genome assembly, chromosome: 10.
OY998260.1:17134791-17134810
ACGAAATCAAGAACAACATTGCCGAAATTA17134791GAGAATACGGAGAGAGAGAGGGATGAGAGCGGAAGATGGTTACATGAGAA
Pemphredon lugubris genome assembly, chromosome: 1.
OW121815.1:778857-778876
GGGAGCGAGCTAGAGAAGCGGTAAGCCAGA778857GAGAATACGGAGAGAGAGAGGGGGGGTGGGAGAGGGGAGGGGAGAGAGAG
Schistosoma haematobium genome assembly, chromosome: 6.
OX103967.1:24402851-24402870
AGAAAGCTTTCTTTCATATCAAAACCACAT24402851GAGAATACGGAGAGAGAGAGATAAGAAAAAACTTATTGTCTTCAGTGAGC
Schistosoma curassoni genome assembly, chromosome: 6.
OX104145.1:21699875-21699894
AGAAAGCTTTCTTTCATATCAAAACCACAT21699875GAGAATACGGAGAGAGAGAGATAAGAAAAAACTTATTGTCTTCAGTGAGC
Tridacna gigas genome assembly, chromosome: 15.
OX244042.2:40482583-40482602
TATCCATAAAAACGAAAAGAGAGAGAGAGA40482583GAGAATACGGAGAGAGAGAGACAGACAGAGAGAATACGGAGAGAGAGAGA
Tridacna gigas genome assembly, chromosome: 15.
OX244042.2:40482612-40482631
AGAGAATACGGAGAGAGAGAGACAGACAGA40482612GAGAATACGGAGAGAGAGAGACAGACAGACAGAGAAAGAGTAAAAGATAC
Cryptocephalus moraei genome assembly, chromosome: 5.
OX276457.1:26670753-26670772
AGAGAAGATAATTGTTAATCGAGGAACGTC26670753GAGAATACGGAGAGAGAGAGAAAAAGCCTGTTGAGTTCATTTTTTTTTCC
Apoda limacodes genome assembly, chromosome: 18.
OX291558.1:21643006-21643025
TCTCTCAACATACCAGATGCTTCTAAAATT21643006GAGAATACGGAGAGAGAGAGATCCTTAATTGTGCCGTGACACGAGCACAA
Octopus vulgaris genome assembly, chromosome: 17.
OX597830.1:27338580-27338599
GGTAAAAAGGAAGAATGAAAAACATATGGA27338580GAGAATACGGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAGTGAGAAGGAG
Eudasyphora cyanicolor genome assembly, chromosome: 1.
OZ005734.1:102070902-102070921
GATACACATTGAGAAAGAGAAATTTGAGAG102070902GAGAATACGGAGAGAGAGAGAATACGGAGGAAGGTTTCTCATTGAAAGTT
Sepia lycidas genome assembly, chromosome: 3.
OZ010573.1:130784532-130784551
TTGGGGAGGAGAGAGAATGAAACAGGGAAA130784532GAGAATACGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGAATACGGAGAGAGAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGAATACGGAGAGAGAGAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.464 | 0.456 | search_plus_done; http://172.18.8.135:50400/match?q=GAGAATACGGAGAGAGAGAG&k=0&no_gap=0&offset=0&limit=50
0.619 | 0.155 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTCTCTCTCCGTATTCTC&k=0&no_gap=0&offset=0&limit=0
0.619 | 0.000 | cgi_end;

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