GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:40:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Triticum timopheevii genome assembly, chromosome: 4At.
OY997267.1:123308665-123308684
GAACTGTGTGTCTAAGGTTGATCGTAACAG123308665GAGACAGGGGATGATGAAGGAGTGCACCTAGGGTAGGGTCATAGACCTGA
Harmothoe impar genome assembly, chromosome: 4.
OX381707.1:59140505-59140524
TGGTGACAATGGACTGTAGCAAGCCTGCAG59140505GAGACAGGGGATGATGAAGGAATGGGATGGAGAAGGTTTTCTCACTTGAT
Erpetoichthys calabaricus genome assembly, chromosome: 3.
LR536434.2:8266459-8266478
ATTGCCCACCATGGCCTAGAAAATCTGGTC8266459CCTTCATCATCCCCTGTCTCTAATTGGCTAAGTATCTCTCACCCCTTCAC
Solanum dulcamara genome assembly, chromosome: 5.
OX359256.1:2468608-2468627
ACACCAAAATCCCCTTTTCCATACTCAAAA2468608CCTTCATCATCCCCTGTCTCTTCAAAATTCAACCCACTCATCCCCGCTGC
Triticum monococcum genome assembly, chromosome: 4A.
OY737853.1:117607378-117607397
TCAGGTCTATGACCCTACCCTAGGTGCACT117607378CCTTCATCATCCCCTGTCTCCCGTTACCATCAACCTTAGACACATAGTTT
Triticum monococcum genome assembly, chromosome: 4A.
OY737861.1:117822220-117822239
TCAGGTCTATGACCCTACCCTAGGTGCACT117822220CCTTCATCATCCCCTGTCTCCCGTTACCATCAACCTTAGACACATAGTTT
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:678791193-678791212
GCTCCATAAACTTGGCTTCATAATCATTAA678791193CCTTCATCATCCCCTGTCTCATCTGCTCAGATTGTGAAATCTTCTCATCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGACAGGGGATGATGAAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGACAGGGGATGATGAAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.218 | 0.210 | search_plus_done; http://172.18.8.135:50400/match?q=GAGACAGGGGATGATGAAGG&k=0&no_gap=0&offset=0&limit=50
0.311 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCATCATCCCCTGTCTC&k=0&no_gap=0&offset=0&limit=48
0.315 | 0.003 | cgi_end;

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