GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 15:32:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Humulus lupulus genome assembly, chromosome: X.
OY720650.1:205877322-205877341
GCTGAAGACATATGAGTACTAAACCTCAAC205877322GAGAGACTCGGTTGAGCATTGGAAAACTCCATAATTTCGAATTCTTAAGT
Cybosia mesomella genome assembly, chromosome: 20.
OX276408.1:28215204-28215223
ACATCCGCAACTGTACTGTGACCGTCGGGC28215204GAGAGACTCGGTTGAGCATTTTTCGTTATTTCTATAGTTTCGGATTTGGC
CSATR1JP-T3-026_L08_19DEC2008_022 CSATR1JP Cannabis sativa cDNA, mRNA sequence.
JK497676.1:207-226
TTTTTTTGTTGTTGACATATGGAGTTTTCC207AATGCTCAACCGAGTCTCTCGTTGGGGTTTAGTACTCATATGTCTTCAGC
TSA: Cannabis sativa PK11736.1_1.CasaPuKu mRNA sequence.
JP449800.1:198-217
TTTTTTTGTTGTTGACATATGGAGTTTTCC198AATGCTCAACCGAGTCTCTCGTTGGGGTTTAGTACTCATATGTCTTCAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGAGACTCGGTTGAGCATT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGAGACTCGGTTGAGCATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=GAGAGACTCGGTTGAGCATT&k=0&no_gap=0&offset=0&limit=50
0.244 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=AATGCTCAACCGAGTCTCTC&k=0&no_gap=0&offset=0&limit=48
0.245 | 0.001 | cgi_end;

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